Thiosulfatimonas sediminis: THMIRHAS_24090
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Entry
THMIRHAS_24090 CDS
T06859
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tse03400
]
THMIRHAS_24090
Enzymes [BR:
tse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
THMIRHAS_24090
DNA repair and recombination proteins [BR:
tse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
THMIRHAS_24090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
HlyIII
Motif
Other DBs
NCBI-ProteinID:
BBP47036
UniProt:
A0A6F8PY58
LinkDB
All DBs
Position
complement(2617027..2618586)
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AA seq
519 aa
AA seq
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MSVENKKSLRHLCLVFGDQLDQKSNLFANFDAEQDAIWMAEVSDESTQPSSSKQRTVLFL
AAMRHFAAWIEQQNWPLIYFALSARQSSFVSALAHTLSEYSVQQIRCVLPGDYRVLQMLQ
DFCQQNEMALQILPDSHFIAEPGEFSTWAQDRQQLRMEYWYRQLRKRCDILMNNGKPEGG
KWNYDADNRKAFGKAGPPKIPMPCDFAEDEIVQQVRQDVAEILPNLAGNLPRFFWPVNRA
QALVALEDFIAKRLPTFGDYQDAMWKGEPWLFHSRISMAMNVKLLHPMEVIQAAQYAYRQ
GQAPLNAAEGFIRQVLGWREYVRGIYWLQREQWTQFNALNNHRDLPQIYWHGETRMNCMR
QSLQQVFDYGYGHHIQRLMVTGLYALLAEVEPQQIEAWYLAMYVDAVAWVEVPNTLGMSQ
FADGGILASKPYIASGSYINRMSNYCSGCAFKPQAASGEKACPFTTLYWHFIYRHQSWLA
EHPRLAMQVKHWLNKSESEQQAILQKAEQIFAQQTSQLY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgaaaacaagaaaagcctgcgccatctatgtttagtgtttggtgaccaactc
gatcaaaaatcgaatctgtttgccaattttgatgccgagcaggacgcgatttggatggcg
gaagtcagcgacgaatcgactcagccttcgtcgagcaaacagcgcacggtattgttcttg
gcggcgatgcgtcatttcgccgcatggattgaacagcaaaattggccgctgatttatttt
gcgttgagcgcgcggcaatcgagtttcgtcagtgctttagcgcacacactgagcgagtat
tcagtgcagcaaatccgctgtgttctacccggcgattatcgggtgttacagatgttgcaa
gatttctgtcaacaaaatgagatggctctgcagattctccccgatagtcactttattgcc
gagccgggcgagtttagcacgtgggcccaagaccgacagcaattgcgcatggaatattgg
tatcggcagttgcgcaagcgttgcgatattttgatgaataacggcaaacccgaaggcgga
aaatggaattacgacgctgataaccgcaaggcgtttggcaaggccggtccaccaaaaatt
cccatgccatgcgactttgcagaggatgaaattgttcagcaggtgcgccaagacgttgca
gaaatcttgccgaatctagcggggaatttgccacgctttttttggccggtgaatcgtgcg
caggcattagtggccttagaggattttatcgctaagcgtttgccgactttcggcgattat
caggatgcgatgtggaagggtgaaccgtggttgttccatagccgaatttcgatggcgatg
aacgtgaaactcttgcatccgatggaggtgattcaagcggcgcaatacgcctatcgccaa
gggcaagcgccgttaaatgcggcggaagggtttatccgtcaggttcttggctggcgtgag
tatgttcgcggcatttattggttgcagcgcgagcagtggacgcaatttaatgcgctgaat
aatcatcgtgatttgccgcaaatttattggcacggcgaaacgcggatgaactgtatgcgg
cagtcgttacaacaggtattcgattatggttatgggcatcacattcaacgcttgatggtg
accggtttgtatgcgttgttggccgaggttgaaccgcaacaaattgaggcgtggtatctg
gcgatgtatgtcgatgcggtcgcttgggtggaagtaccgaataccttgggcatgagccag
tttgccgacggcggcatcttggcctctaaaccttatatcgccagtggcagttatattaat
cggatgtcgaactattgcagcggttgtgcttttaagccgcaagcggcaagcggcgaaaaa
gcgtgtccgtttaccacgctgtattggcattttatctaccgccatcaatcgtggttggcg
gagcatccgcgtttggcgatgcaggtcaaacattggctcaataaaagcgagtctgagcag
caggcgattttgcaaaaagccgagcagatttttgcgcaacaaacatcccagttgtactga
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