Trachymyrmex septentrionalis: 108745758
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Entry
108745758 CDS
T11226
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108745758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108745758
Spliceosome [BR:
tsep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108745758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
108745758
NCBI-ProteinID:
XP_018337593
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MQMQETEGADGSPWNNSSGCDEERRLAPKEGKKSNVLPLWGNERTMNLNPLILTNIQSSH
YFKVNLYELKTYHEVIDEIYYKVSHLEPWEKGSRKTAGQTGMCGGRFMQVRGVGAGGIVS
TAYCLLYKLFTLRLTRKQLNGLINHPDSPYIRALGFMYIRYTQPPADLFSWYNDYLEDEE
ELDVKAGGGQVMKMGDILKQFLTKLEWFSTLFPRIPVPIQKDLELRLAERFPQQQVNARN
AKPPITLNSHGKYGNKDGRKDNGNLTSRNQQPRHIPDNETQWGEAERMSQWRARTDEDRK
DKNRERDRDRERLRERDRERARERDRERDRYSKRSNSRDRNRRQKDYRSRSRDRSHRDRH
RDRDRHRDRRGSPYDYATELARERERQRRERE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcaggagactgaaggtgcggatggatctccatggaataactccagtggttgc
gatgaggaacgtaggctagctccaaaggaagggaaaaagtcaaatgtgttaccactatgg
ggcaacgagaggactatgaatttgaatcctttgattctcaccaacatacagtcgtcgcat
tattttaaggtgaatctgtatgaactcaagacctatcatgaggtgattgatgagatctat
tataaggtctctcacttagaaccatgggaaaaaggcagcagaaagactgcgggccaaact
ggcatgtgtggaggccggttcatgcaggtacgaggcgtgggagctggcggaattgtttct
acggcatattgtctattatacaaactcttcacactgaggctaactagaaagcaattgaat
gggcttattaatcatccggactcaccatacatacgtgccctaggatttatgtatattaga
tatacacagccaccagcagacttgttcagctggtacaacgattatctggaggatgaagag
gaactagatgtgaaggcgggtggcggacaagtgatgaaaatgggcgacattctcaaacaa
ttccttaccaaactcgagtggttctctacattgtttccacggataccggtaccaatccaa
aaagatttagagttgcgattagccgagcgttttccgcaacagcaggtcaatgcacgaaat
gctaagccgccaatcaccctcaatagtcatggcaagtatggcaacaaggatggtcgtaag
gacaacggtaatttgacatcgcgtaatcagcaaccccgtcatatccccgataacgagact
cagtggggtgaggccgagcgcatgagccagtggcgtgccagaactgatgaggatcgtaag
gacaagaatagagagcgcgatcgcgatcgcgagaggttgcgggagcgtgatagagaaaga
gctcgcgaacgggatcgtgaaagagacagatatagcaaaagatcgaatagtcgtgacaga
aatagaagacagaaggattatagaagccgtagcagagacagatcacatagagatcgccat
cgcgacagagaccgacatcgagataggagaggctcaccatatgactatgctacagaattg
gcacgcgaacgcgaaaggcaacgaagggaaagagaatga
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