Trachymyrmex septentrionalis: 108745945
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Entry
108745945 CDS
T11226
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
tsep
Trachymyrmex septentrionalis
Pathway
tsep03420
Nucleotide excision repair
tsep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108745945
09124 Replication and repair
03420 Nucleotide excision repair
108745945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsep03051
]
108745945
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108745945
Proteasome [BR:
tsep03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108745945
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108745945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Ubiquitin_2
UBA_Ucp12
Crinkler
UBA_3
OTU1_UBXL
Dsc3_N
Rad60-SLD_2
TBK1_ULD
ALIX_LYPXL_bnd
Ubiquitin_5
UBA2_UBAP-1
Ubiquitin_4
UBA_9
UN_NPL4
DUF4248
UBA_2
Motif
Other DBs
NCBI-GeneID:
108745945
NCBI-ProteinID:
XP_018337876
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MIITLKNLQQQTFTIEIDSSQTVKDLKEKIETQKGFPAEHQKLIYAGKILADEQPLAEYN
IDEKKFIVVMVTKPKTGATPKTSEEQRTEGDKKEESTSSATTQPSSNPNVQDTTRAASNV
QEQPVAAAPAAGQAESALLMGEDYNTMVNNIMDMGYEREQVVQALRASFNNPDRAVEYLI
TGIPAQLFEDPPEDPPEAQEQLQDQSQDPLAFLRLQPQFQQMRQVIQQNPQLLNNLLQQI
GSTNPALLQLISQNQEAFVRMLNEPVEPTTGTGARVLPSGGGVGPAAAATAGGAVNGGPG
AGAATGVGSGLIQITPQDREAIERLKALGFPEHLVVQAYFACEKNENLAANFLLSQNLDD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgattataacgctgaaaaacttacagcagcaaaccttcacgatagagatcgactcgtcg
caaactgtcaaagatctcaaggaaaagatcgaaacgcagaaaggcttccctgccgaacat
caaaagttgatatacgctgggaaaatattagcggacgagcagcctttagcagaatataat
atcgatgagaagaaatttatagttgttatggtaacaaagcctaaaactggtgctacacct
aaaacaagcgaagaacagcgcacagagggtgataagaaggaggaatctactagctcagca
actacacaacctagttcgaaccctaatgttcaggatactacacgagcagctagtaatgtg
caagagcaacccgtagcagccgctccagcggctggtcaagcagaaagtgccttgctaatg
ggagaggattataatactatggtaaacaacattatggatatggggtatgaacgtgagcag
gtcgtacaggcgctgcgcgcgagttttaacaaccctgatagagctgtcgagtatcttata
acaggtataccagcgcaactcttcgaggatccacctgaagatccgccggaagctcaagaa
caacttcaggatcaaagtcaagatccattggcctttttacgtttgcagccacaatttcaa
caaatgcgtcaagtcattcaacagaatccacagctgctgaacaatcttcttcagcaaatc
ggttccactaatcctgcccttttacagcttatttctcaaaatcaggaagcatttgtacgc
atgcttaatgaacctgtggaacctactacgggaacgggggcgcgagttttaccatctgga
ggaggcgtaggacccgcggctgcagctactgcaggaggcgctgtgaatggtggacctggc
gcgggtgcagcaacgggcgtaggatccggtttaatacagataacaccacaagacagagaa
gctattgaaaggttgaaggcgttaggttttccagaacatttagtcgtacaagcatatttc
gcctgtgaaaagaacgaaaatctcgctgctaacttcctactttcgcaaaaccttgacgac
tga
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integrated database retrieval system
