Trachymyrmex septentrionalis: 108746115
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Entry
108746115 CDS
T11226
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108746115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108746115
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108746115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D2
HBS1_N
AAA_22
Dynamin_N
Ras
Motif
Other DBs
NCBI-GeneID:
108746115
NCBI-ProteinID:
XP_018338175
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MSRHRDVRSMNYSDEYDGYDDVYGHSIEDDYCVSPSVEQFLYDRSKQQNIASFITEPDIV
EDNEDIDEPFPSSNEEKFNLSELEKAKLISCLETIRNVIGDTVSDSKLKEKIILSNFDAN
IVLDAILKESSPKKVTDSMENKKQLERHPGSKLSSKPTLQVTTPSTVKVVPTGTKPIVKG
FDLSGVENTDLLSPRCGSPSSNRNSPEVKRKEDIVQKEKRIVSSKMNSPRCQSPISGHVT
SELDIKVKSNASNEEKVDVEAIYNSKRGGSKEQLHLVVVGHVDAGKSTLLGRLLCDLGQV
PQRLIHKYQQESKKIGKQSFAYAWVLDETGEERERGITMDIGHSKFETDTKSITLLDAPG
HKDFIPNMITGVTQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVVNK
LDTVNWSKDRFNEIVDKISVFLKQAGFKDTVTFVPCSGLSGENIVTKPKEQLSNWYTGPT
LVNVIDNFKCPERPINKPFRFSVNDIFKGTGSGFCVSGHVETGMVSLSDKVLVLPQNEVA
VVKGLQSDEASIANAFAGDHVALTLAGIEQQNVGIGDIICNPQNPVPVTTCFQAHVVIFA
IAKPIIKGLPVVMHQQSLVQPAVIIKLIAQLHRSTGEVIKKKPRCLPKNSSAIIEVATQT
PVCMELYKDIKQLGRVMLRLEGTTIAAGLITKIL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacatcgagacgttcgttctatgaattactctgatgagtacgatggctatgat
gatgtttatggacattcaatagaggacgactattgcgtatcacctagtgtggagcaattt
ttatatgatcgaagcaaacaacaaaatattgcttcattcatcacagaacctgatatagtg
gaagacaatgaagatattgatgagccttttccatcgtccaatgaagaaaaattcaatctt
tctgaattggaaaaggcaaaattaatatcttgtttggaaacaattagaaacgttataggt
gacacggtatctgattctaaattgaaagagaaaattattctgtcaaattttgatgcaaat
atagtacttgatgctattttaaaggagtcttcaccaaaaaaagtcactgattctatggag
aataagaaacaattggagcgacatccaggtagcaaattatcatcaaaacctacgttgcaa
gtcacaacaccatctactgtaaaggtcgtaccgaccgggacaaaacctattgtgaaaggt
tttgatctaagcggtgtagaaaatacagatttgttgagcccacgttgtggaagtccgtct
tccaatcggaacagtcctgaggtcaaacgcaaggaagatatcgtacaaaaggagaaaaga
atagtctcatcaaaaatgaatagtccaagatgtcaatcacctatatcgggtcatgtaaca
tcggaattagatattaaagtaaaatctaatgcatctaatgaagaaaaagtggatgttgaa
gcgatatacaacagtaagagaggcggcagtaaggaacagcttcacttggtagtcgtggga
cacgttgatgctggaaaaagcacattacttggacgattactctgcgatttgggtcaagta
ccacagagacttatccataaatatcaacaagagagcaaaaaaataggaaaacaatcattt
gcctatgcttgggtactcgacgaaactggcgaagaaagagagcggggaataacaatggat
ataggccactcgaagtttgaaacggacacaaaatctatcactctgctagatgcacctggc
cacaaggattttattccgaatatgataaccggcgttacgcaagcagatgtagctttgtta
gtagtcgatgcaaccagaggcgagtttgaaactggattcgatagtggaggacagacacgc
gaacacgccctattactacgctctttaggagtatcacaactagcagtagttgttaacaag
ctggataccgtaaattggtctaaagatagattcaatgagatagtggacaaaataagtgtg
ttcctaaaacaagctggcttcaaagataccgttactttcgtaccttgcagcggtttatct
ggagagaatattgtaacaaaaccaaaggaacaactctctaattggtataccggacctact
ctagttaacgttatcgataattttaagtgcccagagcggcctataaataaaccatttcgt
ttttcggtgaacgatatatttaagggtactggatctggattttgtgtgtctggtcatgtt
gaaacgggtatggtatccttgagtgataaggttttagtactacctcaaaacgaggttgca
gttgttaaaggtcttcagtcggatgaagcttcaatagcaaatgcttttgctggtgatcac
gttgcgctgacattagcgggaatcgagcagcaaaatgtgggtatcggcgatatcatctgt
aacccacagaatccagtacccgtaacgacctgttttcaagcgcacgttgttatattcgcg
atagcaaaaccaatcataaaagggcttccagtagtgatgcaccaacaatctttggtacaa
ccggcggttatcataaaattaatagcgcaacttcatcgaagtactggtgaggtgatcaag
aagaagccgcgttgcttacctaagaattccagtgcgatcatcgaggtcgcaacgcagaca
ccagtttgcatggagttgtataaggatattaaacagttaggtagagttatgttacgatta
gaaggtaccactatcgcagctggtttaattacaaagattttataa
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