Trachymyrmex septentrionalis: 108746149
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Entry
108746149 CDS
T11226
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsep04515
]
108746149
Cell adhesion molecules [BR:
tsep04515
]
Cadherins
Cadherin related
108746149
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Glyco_hydro_16
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
108746149
NCBI-ProteinID:
XP_018338225
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MLPQATTGALLCGLLALYVGLTHASIAAAFESTPSSSFDHGAPRLDLESLESGYHGLVKE
NETLVEVTPQIRALGTKVCSFRIANKHHGEAPFEIVLKEKGMAELRAFRVLNCEKRRNYK
FDIAAVGCNGVQSENATVHITVVDVNEYAPQFLQPAYVSTVDEGRLYEEVVRVEASDRDC
TPKFGDVCKYEILTADQPFIIDNEGAIRNTEPLDYERSHNYILSVVAYDCGMKQSAPAMV
TVKVNRVCAPGWRGIPERVDYAAGVGSQPLLPSARLDLCDAPCILRNVRATLTLATDHIG
KGCDRDTYGVRSQRKLCGASRDSVDLLPTPGPTTSWTATLSRDEGREADEIFEFDGVDSA
AIVPNDVLEHSLAQKFTIGVWVKHRPRPRQDPHVKEHILCAADDHKMNRHHYALFIRNCR
LILLLRRDFSEGDPNIFRAAEWRWKLGQVCDDKWHHYAIQVDFPRVNLYVDGEEWHADEK
NPEVIDDWPLHPAKGVNTTLVVGACWQGSENKTKHHFRGYLAGLSVLVGRNEKPEVLSCL
RRCQEGIHVPPMDLLQPGTQLLTNSDMTEVRIDGDNRTNVETLLRRIGYSNTRRFPTPGR
RNFRLDTTIVCEGSENTPLPVPTVQSYVTVLPPPRPGITVNGTGYVAREYADFRLGVRVF
PDARVTAGSAARLDACAVSVYPSLNPDHESLGLPGDALLAFHDISARVDRDGVVLSGADS
PYNYQQLIRLIMYTNRKPAYYLDRVFKLTCSELSGRFASNEYVQTLAVIHPKEKTTVLPR
TTPGEPPIARIVEPAPGHAQLSPHHADLTEEYATAALREGSRTISGTGSSHAVTIVAAAC
IGFLLLMAVVGAARVRGAAKRRRSAGDELAAETEMAWDDSALAITVNPMDRLTEHDQHHQ
SQRDEDVDDSGSSDSEDGSFRDDDLDSSDCENDCDLSNGRHRRHNSPHDLEWDHRDV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcaggcgacgacgggtgcgctgctctgcgggctgctggccctctacgtgggg
ctcacccacgcgagcatcgccgcggccttcgagtcgacaccttcgagctccttcgatcat
ggagctccacgactggacctggagagtctcgagagcggatatcacggcctggtcaaggag
aatgaaactttggtcgaggtcacgccgcagatccgcgccctgggaacgaaagtttgctcc
ttccgcatcgcgaacaaacaccacggcgaggcgccgttcgaaattgtcctgaaggagaag
ggaatggccgagctgcgggcgttccgagtcctgaattgcgaaaaacgccgtaattacaag
ttcgacatcgccgcggtcggctgcaatggagtgcaatcggaaaacgccacggttcatatt
actgtggttgacgtcaacgagtacgcgccgcagtttctccagccggcctatgttagtact
gtggacgagggacgcctctatgaagaggtggtccgcgttgaggcgtccgaccgtgactgc
acgccgaaatttggtgatgtctgcaagtacgagatcctcaccgccgatcagccattcatt
atcgacaacgagggtgccatccgcaataccgagcctttggactacgaacgctcacacaac
tacatactcagcgtggtcgcttatgactgcggtatgaagcagtcggcgccggcgatggtg
acggtcaaggtgaaccgcgtgtgtgcccccggatggcgaggaatccccgagagggtagat
tacgctgccggcgtcggttcacagcctctactgccctcggcgcggcttgatctttgcgat
gcaccctgcatcctgcgcaacgtgcgcgccaccctgactttggccaccgatcacatcggc
aagggttgcgatcgtgacacgtatggggttcgcagccagcggaagctatgcggtgcctcg
cgcgacagcgtggatctactgcccacacctggacccacaacctcttggacggccactctt
tccagagacgagggtagagaggctgatgagatctttgagttcgacggcgtagactcagcc
gcgatcgtgccgaacgatgtgctggagcatagcctggcgcagaagtttaccatcggtgtc
tgggtcaagcaccgaccacgcccgcgacaggatccacatgtcaaggaacacatcttgtgt
gctgccgatgatcacaagatgaataggcaccattacgccctgttcataaggaactgcaga
ttgattttgctgctgcgacgcgacttctccgagggtgatcccaacatcttccgtgctgcc
gaatggcgttggaagcttggtcaggtatgcgacgataagtggcatcattacgcaattcag
gtagacttcccacgtgtcaatctatatgtggacggcgaagagtggcatgccgacgagaag
aaccctgaagtcatcgatgactggcctttacacccggctaagggcgtcaataccaccctt
gtggtcggagcgtgctggcagggctccgagaacaagaccaaacaccatttccgtggttac
ctcgccggtttgtcagttttagttggccgaaacgagaaaccggaagtactctcgtgtttg
cggcgttgtcaggaaggcattcacgtgccgccgatggacttgttgcaaccgggtactcag
ctgctgaccaattccgatatgaccgaagttcgtatcgatggtgacaatcgtacaaacgtg
gaaaccttgctgcgtcgtatcggctactccaacactcggcgtttcccgacgcccggccgt
cgtaacttccgccttgacacaacgatcgtctgtgagggtagcgagaacacgcccctaccg
gtaccgactgtgcagtcctacgtcaccgtactaccgcctcctcgaccaggcatcaccgtc
aacggtaccggttacgtggcccgggaatacgctgatttccgattgggagtacgtgtattc
cccgacgcgcgcgtcaccgccggatcggccgcccgattggatgcttgcgctgtcagtgtt
tatccaagtctcaatccagatcatgagagcttgggattacctggtgacgccctcctcgca
ttccacgatatctccgctcgcgtcgatcgggatggcgtcgttctctctggcgcggattcg
ccttacaactaccaacaactcattcgtcttatcatgtacacgaaccgtaagccggcttac
tatctcgatcgtgtctttaaacttacctgctccgagttgagcggccgcttcgccagtaat
gagtacgtgcaaacattggccgtaattcatcctaaggaaaagacgaccgttttgccgcgt
acgacgcccggagaaccgcccattgccagaatcgttgaaccggcaccaggtcacgcgcag
ctctcgccgcatcatgccgatctaacggaggagtatgctacggccgcgcttcgcgaaggc
agcagaaccattagcggcactggcagcagccatgccgtgactatcgtcgccgccgcttgc
atcggattcctgctgctgatggcggttgtgggcgctgcgcgagtccgcggggcggccaaa
cgacgacgatccgccggtgacgagctcgccgcagagacggagatggcctgggacgactcg
gccctcgctatcaccgtgaatccgatggacaggttgacggaacacgaccagcatcatcag
agccagcgggacgaggacgtggacgactccggtagctccgattccgaggatggctcgttc
cgagatgatgacctcgacagctccgactgtgagaacgattgcgatctcagcaacggtcgg
caccgccgtcacaactcgccgcacgatctggagtgggatcatcgtgatgtttaa
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