Trachymyrmex septentrionalis: 108746189
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Entry
108746189 CDS
T11226
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsep03000
]
108746189
Transcription factors [BR:
tsep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108746189
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
108746189
NCBI-ProteinID:
XP_018338302
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Position
Unknown
AA seq
514 aa
AA seq
DB search
MHTMETDMKGGSLHAQMPPHPHQGVSPMGHHTGMSPYGSLGSIVHSSALSGSPPGAGGLG
LGLQHHHQTSQHHYAMSAAAVAAAAVQQQQQQQQQQSMHAMAVQQSAQQQQHHAHQQSQQ
QQSQSQQHHQANNHSNPNNPNNPNNSSNAKNNNMDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSEGEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLIKKDK
FQLGGAVAGVGGMLGVDQRQVGTSGGPQQPQLPRDVYQMPNGYMPNGYMMPDPTTYQQHV
AYSSHMSGAATAGSTVAYPRYDSMGHHIGGSSPSPINMNGYGGYGGYGATVPGGSPSPYH
QAQTGSQISSSHSPSGSSIKSEPTSPASGGIHTPTPTGGPTTTGAAGPVGQVKREYMGQQ
QASQQTQGDLRQMISMYLPQGIGEQGVVQHGGSVYPPGPSPDSLTQHHTMQPISHMSDSD
RKMLNPETGCYSESVRAWDWNATGNVRVQESWPT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatggagacggacatgaagggcggcagtctgcatgctcagatgccaccgcat
ccacaccagggtgtatcgccgatgggccatcacacagggatgtctccttacggatcttta
ggctcgatagttcatagctctgcactgtcgggaagcccacccggcgcgggtggcttgggt
cttggtcttcaacatcatcaccaaacttctcaacatcattacgcaatgtcagctgctgcc
gtcgccgccgcggccgtacaacagcagcaacaacaacaacagcaacagagcatgcacgca
atggcggtccaacagagcgctcagcaacagcaacatcatgctcatcagcaatcgcagcaa
caacaatcgcaatcacagcagcatcatcaggctaacaatcatagcaatccaaataatccc
aacaaccctaacaattcttccaacgccaagaataataacatggatcgcgtaaagaggccg
atgaatgccttcatggtatggtcgcgtgggcaacggcgcaagatggctcaagaaaatcct
aaaatgcacaattctgaaatatcgaaacgccttggtgccgaatggaaacttctcagcgaa
ggagaaaagcgcccttttatcgacgaggcgaagcggttgcgcgctgttcatatgaaggag
catcccgattacaagtatcggccgcgccgcaagacaaagacgctcataaagaaagacaag
ttccagctcggtggagcagttgctggagttggcggaatgctcggcgtggatcaacggcaa
gtaggcaccagcggaggaccacagcaaccgcaattgccgcgtgatgtatatcagatgccc
aatggatatatgccgaacggttacatgatgcctgatccgacaacgtatcagcaacacgtc
gcgtacagcagtcacatgagtggtgccgcaaccgctggctcgactgtggcctaccccagg
tatgattccatgggacatcacatcggcggtagcagtcccagccctatcaacatgaacggc
tatggcggatacggcggatacggtgctactgtacctggcggatcaccatcaccttaccat
caggctcaaacgggttctcagatatccagtagtcatagtcctagtggcagcagcataaag
tccgagccgacgagcccggcgagcggcggcatacacacgccgacgccgacgggcggccca
acgacgacgggcgcggctggccctgtcggccaggtcaagagggaatacatgggacagcag
caagcaagccaacagacgcaaggcgatctccggcagatgatctcaatgtatctgccacaa
ggcattggggagcagggagtcgtgcaacacggtggaagcgtctatccgccgggtccatca
cctgattctttgacgcagcatcataccatgcagccgatttcgcacatgtcagatagcgat
cgtaaaatgttgaacccagagactggctgctactccgaatccgtacgagcatgggattgg
aacgcgacgggcaacgtacgcgtgcaggaatcctggccgacgtga
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