Trachymyrmex septentrionalis: 108746258
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Entry
108746258 CDS
T11226
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03420
Nucleotide excision repair
tsep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108746258
09124 Replication and repair
03420 Nucleotide excision repair
108746258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsep04121
]
108746258
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108746258
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsep04147
]
108746258
Ubiquitin system [BR:
tsep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
108746258
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108746258
TCR (transcription coupled repair) factors
Cul4-CSA complex
108746258
Exosome [BR:
tsep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108746258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
108746258
NCBI-ProteinID:
XP_018338410
UniProt:
A0A195FNM7
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MSKHCDIEFLCVRRVKKVAATAATVAAATATVAATVATVAAAADHTAVLEYASAAECCKL
AAAVSIAHPDEIDAIRVDEIIMTDTASAAAAAADTQKRANFSALTVGNPNGVSKISPSLT
NAKPGSAKKLVIKNFRSKPKLPENYQEETWEKLQEAVVAIQTSKSIRYSLEELYQAVENM
CNHKMASTLYSNLTILTESHVKANIEQFLAESMDRHIFLKKMNECWQSHCRQMIMIRSIF
LYLDRTYVLQNPSISSIWDMGLHLFRLHIVLNSLVQTRTVEGLLMLIEKERQGDTVDRTL
LKSLLRMLSDLQIYQEAFETKFLVATERLYAAEGLRLMNEHDVPEYLAHVDKRLQEENER
LLHYLDTSTKWSLIHTVEKQLLSEHITSILQKGLSGLLDENRISDLSLLYNLYSRIKNGL
VELCLNFNCYIKKKGKTIVIDPEKDKTMVQELLDFKDKMDNIVNTCFHKNEKFANSLKEA
FEAFINQRANKPAELIAKFVDCKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVFEAFY
KKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINIAFKQYAG
NLQSELVANNLDLTVSILTMGYWPTYPVMEVTLPMEMVQYQDVFNKFYLGKHSGRKLQWQ
PTLGHCVLKAWFNQGNKELQVSLFQALVLILFNDSDNLSLEDIKTATNIEDGELRRTLQS
LACGKARVLQKNPRGRDVADNDRFVFNAEFTNKLFRIKINQIQMKETNEEQKATEERVYQ
DRQYQIDAAIVRIMKMRKTLTHNLLISELYNQLKFPVKPADLKKRIESLIDRDYMERDKD
NANQYNYVA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcattgcgatatcgaatttctgtgtgttagacgggtgaagaaggtggccgcc
accgccgccaccgtcgccgctgccaccgccaccgtcgctgccaccgtcgccaccgttgct
gccgctgccgatcatacggcggtgttggagtacgcgagcgcagctgagtgctgcaagctg
gctgcagccgtgagcattgcccatccggacgaaatcgacgcgattagggttgacgagatc
atcatgacggatacggcgtctgcagctgccgctgcggctgacacgcaaaaacgggccaac
ttttcggcgttgacagtcggtaatccgaacggcgtcagcaaaatatcgccgagccttacg
aatgcgaaacccggttctgcaaagaagctcgtcatcaagaacttcagaagtaaacctaaa
ttaccagaaaactatcaagaagaaacatgggaaaaattacaggaggctgtggttgctata
caaaccagcaaaagtatccgctattctttggaagaactttaccaggcagttgaaaatatg
tgtaatcataaaatggcatcaacactttactcaaatttaactattctgacggaatctcat
gtaaaagctaatatcgagcagtttctggcggaatctatggacagacatatatttttgaag
aaaatgaatgaatgctggcaatcacattgtagacaaatgataatgatcaggagcatcttt
ctgtatcttgataggacatatgttttacaaaacccgagcatttcatcgatatgggatatg
ggattgcatcttttcagattacacattgtgctgaatagtttagtgcaaacgcgtaccgtt
gagggtcttcttatgctcatagaaaaggaacgacaaggtgatactgtagatcgaacgctt
ctcaaatcattgttgagaatgttgtcggatctacaaatctaccaagaggccttcgaaacg
aagtttttagtggctacagaaagattgtatgctgccgaaggtctacgattgatgaacgaa
catgatgttcctgaatatttagctcatgtggataaacgtttgcaagaagagaacgaacga
ctgttgcattatcttgatacgtcgactaaatggtcactcatacatactgtagaaaaacaa
ttactgtctgaacatattactagtattttacagaaaggcttaagtgggttgttggatgaa
aatagaattagcgatttatcattactttacaacttatacagtcggataaaaaatggcctt
gtggagctgtgtttgaattttaattgttatatcaaaaaaaaaggcaaaacgatagttata
gatccagaaaaagataaaacaatggtacaggaacttttagattttaaagataaaatggat
aatatagttaatacatgctttcataaaaatgaaaaatttgcaaatagcttaaaagaagct
ttcgaggcttttattaatcaaagagcaaataaaccagcagaattaatagctaaatttgtc
gattgtaagttacgagcaggtaataaagaagcgacggaagaggaattagaaagattatta
gataagattatggtactctttcgatttattcacggaaaagatgttttcgaagcgttttat
aagaaggatttagccaaacgtttgttagtgggaaaatcggcttctgtagacgcggaaaaa
tcaatgttatctaaattaaaacaagaatgcggtggtggatttactagtaaattggaagga
atgtttaaagacatggaacttagtaaagatattaatattgcattcaaacagtatgcagga
aacttgcagagtgaattagtggcaaataacctagatctaactgtatctatacttactatg
ggatattggcctacatatccagtgatggaagtcactctaccgatggagatggtacagtat
caagatgtgtttaataaattttatttgggaaaacatagcggtagaaaattgcagtggcag
ccaaccttaggacactgtgtactaaaagcatggtttaaccagggcaataaagagctacaa
gtatcattgtttcaagcattggttttaattctattcaatgatagtgataacctctcgtta
gaagatattaaaaccgctacaaatatcgaggacggtgaactgagaagaacactgcagtcc
ttggcatgcgggaaggctcgtgttcttcaaaagaacccgcgtggtcgggatgtcgccgat
aacgatagattcgtatttaatgcagaattcacaaacaaactgttcaggattaagatcaat
caaattcaaatgaaagaaacgaatgaagaacagaaagcgacagaagaaagagtatatcaa
gatagacaatatcagatagacgctgctatcgttagaattatgaaaatgagaaaaactctg
acccataatcttctcatcagtgaactgtataatcaattgaagtttcctgtaaagcctgcg
gatttgaaaaagcgaatcgagtctcttatagatagagactacatggaacgagacaaggac
aacgcaaatcaatacaattacgttgcgtaa
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