Trachymyrmex septentrionalis: 108746265
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Entry
108746265 CDS
T11226
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsep03036
]
108746265
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tsep00535
]
108746265
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108746265
Meiosis-specific proteins
Cohesin complex and associated proteins
108746265
Proteoglycans [BR:
tsep00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
108746265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
108746265
NCBI-ProteinID:
XP_018338422
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MYIKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRPDQ
RQGLLHEGTGPRVISAHVEIIFDNSDGRLPIDKDEVYLRRVIGSKKDQYFLNKKIVTRND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSHRLKLLREVAGTRVYDDRREESKSILK
ETEGKLEKIEDFLRTIEERLQTLEEEKEELKEYQRWDKQRRCLEYTIHERELKENKRKLE
ELEESRANSGAEQARLGAEAKTAQEMVRAATKRLKEAKKEVQTAKEERDTLSAEQQQLLK
EKNKLTFTINDLLEEVKGDNDSKKRAQQELEKLKSNIAARETELKSLKPEYERMKRVEEE
CTRELQLKEQKRKELYAKQGRGSQFTTKDERDKWIQNELKQLTKQIKDKEEHQKKISEDL
KRDAEKQIALEKKIGDHTREMEQQRASIDDHNKQYYELTKSKDQCQATRKEQYRQESVLQ
LNLSGLKEDLAKADQSLRSMAGKPILNGRDSVRKVLDTFRGRKDMVNEVSSYYGPVIENF
NCDKSVYMAVEVTAGNRLFHHIVETDKFGTKILKEMNNQRLPGEVTFMPLNRLHVKDIDY
PQTSDAIPMISKLNYDPKFDKALRYIFGKTLICRNLEAATTLARDSGLDCVTLEGDQVSS
KGSLTGGYFNTLRSRLEIQKTRSELMSQISTLETQLTTLKEEIRKADQNISSYVSEMQRT
ETKNSKAKDIYDKMKAEIRLMKEELSAIERYRTPKEKSLAQCTSSLEAMRATKDGLESEL
HQELMAQLSVADQHQVDTLNDDIRRLTKENKEAFAKRMQLEAEKNKLENLLTNNLVRRKD
ELVQALQEISVEDRQRQLDSSKIQLADIEKRLMKVNEDFKAQNEKVTNAMKKQKSESAEV
EKWKLKEKEAQEKIEADAKDLEKLASKLNILQQKIVECTQKITELGALPSHEAYSKFSTM
STKQLFKEMEKANNHLKKYSHVNKKALDQFMSFSDQKERLVKRKEELDRGDEKIKELMSV
LEQRKCEAIQFTFKQVSKYFSEVFKKLVPSGHAQLVMKTADGDEGDDGTAEPSDSDRFIG
VGIKVSFTGHRGEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRK
AVADMIHELSSDAQFITTTFRPELLHHANKFYGVKFRNKVSHVECVTREEAADFVEDDTT
HG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaagcaggtaattatccaaggatttaagtcatatcgtgaacagacggttgtt
gagccttttgatccaaggcacaatgtagtggttggcagaaacggttctggaaagagtaac
ttcttttacgcgattcaatttgtccttagtgatgaattctctcatctcagaccagatcag
agacaaggactgttgcatgaaggaacaggacctcgtgttatatctgcccatgtagaaatc
atatttgataattctgatggaaggttaccgatcgataaagatgaagtttatttaagaaga
gtaatcggctccaagaaggaccaatattttctcaacaaaaagattgtaacaagaaatgac
gtaatgaatttattagagtcggcaggattttctaggtccaatccatattatattgtgaag
caaggaaagataaaccaaatggcaacagcaccagattcccacagattgaaattattaaga
gaggtagcgggtactagagtatatgatgatagaagagaagaatcaaaatctattttgaaa
gaaacagaaggaaaactagaaaaaattgaggattttctgcgaacaattgaagagcgtttg
caaacacttgaggaagaaaaggaggaactgaaagaatatcaacgttgggataaacaacgt
cgttgtttagaatatacgatccacgaacgtgaacttaaagaaaataaaagaaaattagaa
gaacttgaggagtctagagcaaatagtggagccgagcaggcgagattaggtgccgaagct
aaaacagcgcaagaaatggtacgtgcagctacgaagaggctaaaggaagcaaaaaaggaa
gtgcagactgccaaagaagaaagagacactcttagtgcagagcaacagcaattgttgaaa
gaaaagaacaaattaacttttactattaacgacttgctagaagaagtaaaaggtgataat
gacagcaagaaacgagctcaacaagagttggaaaaattgaagtctaatattgctgctcga
gaaaccgagctaaagtctcttaagccagagtatgaacgaatgaaacgtgttgaagaggag
tgtacgcgagaattacagttaaaagagcagaaacgtaaagaattatatgctaaacaaggt
cgtggtagtcaatttaccactaaggatgaaagagataagtggatacaaaatgagcttaag
caacttacaaaacagataaaggataaagaagagcatcaaaaaaaaattagtgaagattta
aaacgtgatgcagagaaacagattgctttggagaaaaaaataggagatcatacacgcgag
atggaacagcaacgtgcgtcaatagacgatcataacaagcaatattatgagcttacgaaa
tcgaaagatcagtgtcaagcaactcgaaaagaacagtatcggcaggagagtgtattgcaa
ttaaatttatctggtctaaaggaagatttagcgaaagcagatcaaagtttaagatctatg
gctggcaaacctattttgaatggcagggatagcgtacgcaaagtactagatacttttcgt
ggacgaaaagatatggttaatgaagtgagcagctactatgggcctgtaattgaaaatttt
aactgtgacaagagcgtctacatggcagttgaagtaaccgccgggaatagattgtttcat
cacattgtggagaccgacaagtttggcacaaaaattttaaaagaaatgaacaatcaacgg
ttgccgggagaagtaacttttatgccactgaatagacttcacgtaaaagatattgattat
ccgcaaacctctgatgctatacccatgatatccaagttgaattacgatcccaaatttgat
aaagcgttaagatatatatttggaaagactttgatctgtcgtaatctggaagcagcaacg
actttggcgcgggattctggcttagattgcgttacattagaaggagaccaagtttcatcc
aaaggctccttaactggcggatatttcaatacactcaggtcacggcttgagatacaaaaa
actagatcggaattaatgtcacaaatttctactctcgaaacccaattaacgacgcttaag
gaagaaatcagaaaggcggatcaaaatattagttcttacgttagcgaaatgcagagaact
gaaactaaaaatagtaaagctaaagatatatacgacaaaatgaaagcagaaatacgtctt
atgaaggaagaattaagtgctatagaaagatatcggacaccaaaagaaaaaagtcttgca
caatgtacttcaagtttggaagctatgcgtgcgactaaagacggcctggagagtgaatta
catcaagaacttatggcacaattatccgttgcggatcagcatcaggtcgatactttaaat
gacgatatcagacgtttaacaaaggagaacaaagaagcgttcgcgaaacgaatgcaatta
gaagcagagaagaataagttagagaacttattaacgaacaacttagtgaggagaaaggac
gagctagttcaagctttacaagagatatcggtcgaagatagacagcgtcagcttgattca
tcaaaaatccagttagcggatatcgaaaagagattaatgaaggtaaacgaggacttcaaa
gcacaaaatgaaaaagtaaccaatgctatgaagaaacaaaaatcggaatctgcagaagtt
gagaaatggaaattaaaagaaaaagaagcgcaagagaagattgaagcggatgcgaaagac
ttggaaaaattagcaagcaagttaaatatcctgcaacagaaaatagtagagtgtacacaa
aaaattactgaacttggcgcattgcctagtcacgaagcttattctaagtttagtacaatg
tccacgaaacagctttttaaggaaatggaaaaggcaaataatcatttaaaaaaatatagc
catgtgaataaaaaagctttggatcaatttatgtccttcagcgatcagaaagaaagatta
gtgaaacggaaagaagaactggatcgaggtgacgagaaaataaaagaactcatgtcagta
cttgaacaacgcaaatgtgaagcgatacaatttacatttaagcaggtaagcaagtatttt
agtgaggtattcaaaaagcttgtaccttcgggccatgcacaattagttatgaagactgcg
gacggcgatgaaggggacgatggaacagcggagccatcagattccgatagatttataggc
gtaggtataaaggtatcattcacaggacatagaggcgaaatgcgagaaatgaatcaatta
tctggtggacaaaaatcactcgtagcgttggccctgatattcgcgatacaaaaatgcgat
cctgcaccgttttacttgttcgacgaaatcgatcaggcactagatgcacaacacagaaag
gcagtagcagatatgatccatgagcttagttctgacgctcaattcatcaccacgacattc
agaccggaattattgcatcacgcaaacaaattctatggagtgaagttcaggaataaggtt
tcgcatgtcgaatgtgtgacgcgggaagaagcggctgatttcgtcgaggacgatacaacg
cacggttaa
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