Trachymyrmex septentrionalis: 108746270
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Entry
108746270 CDS
T11226
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsep04040
]
108746270
Ion channels [BR:
tsep04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108746270
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_2
VWA
VWA_3
DUF444
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
108746270
NCBI-ProteinID:
XP_018338431
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MPSAGRYFIFYFVLVFVVCLAKDAHIVARWAEKLGTELWELANEVDRPEELLEKYKSMNV
RVEDKSGEELINIISQNVGRMLRRKMDAITCIRIAAEEAAENWDPSLLDDNFSYVSSKCS
PVIGHDSANKNSTNKNCDIHKKNVTVFRDMELISDSHFYDIPVNTTYSSVHIPTNVYDLM
QDVAEDIARTEPLDDIFRQNYESDPALSWQYFGTVTGVLRQYPAMQWRTNLKDTNDDDNI
NDNTIDDNINNNNNVSKNNNEDIADVNDNDDNDDDDSPANVNNDDDNDDSPVDQYDDNDD
DDNFPADQDDDNSSADEYDCRLRNWFIEAATCSKDMVILMDVSGSMTGFGKTIAKTTVNS
ILDTLSNNDFVTLLKYNNETTEFVPCFKDMLIQATPENLDTFKKSMDKIDTDNVANLTEA
FTKAFSLLKTYREERGCDADSPCNQLIMLVTDGVPGGTLGNNLKEVFKKWNWNENSTHIP
VRVFTYLIGKEATKMDELQWMVRSCLNLGDYKKVKTQEEVREQVLKYISVVARPLVLQSV
VHPIVWTHAYADITNPALAAWLWWVMKHGQQKSLEKYLKGKRMGVQINENAIYIQQLHKD
ENIGEDSSTTWQKYRLLTSVSTPVFDRKSNHSNMTDAANDTLFGVAGTDVPIDDIRELTL
PYKLGVNGYAFIVSNNGYVILHPDLRPDYKDQLKLNYNSIDLTEVEILDDKREPRNPGPE
LLELRSALVDHKRGNMMGIPVKLHYDDNRRVNLEKRDYFYAPLPGTPFSLAVVLSNYGTT
WIKVGDEIRRNQNMNVNVSDYFVGDHWRVHPSWVYCRYHYLEGHEFNKPEDELRHFLALM
SRPGWRWSEQYEAYSSIDEDVDEEPNCGRQTLKHDDYYCNKELMQLLVFDAKATNNSFRG
DYMENLSPRARDLAHHYGIFIRFIATQSGLTRWHHLKTSKLLNVDDSVVFGDLHRRAVNE
PWYKGAIFQSELDSESISLSVPWEAGVDAIVTASMSLSPKDGGKKAPAAVVGFQMPMKDL
YKRFIALISDNQTTNTVINCAHNWIHCYLIDQNGYIVISDEHNDTGQFMGTQEGAVMLSM
IKQGLYNPIDIFDYQAWCHETRIDNSANSLMEPLQHIARLLLWFLLRLIWYATQFVNLPG
IHGKVHFDEDAPDPPPPPKPYFYYYSCDQKRTLYMLNETVAAKGVTNHSDYCSRPFYAQR
VAHTNLLLVVVDSMYPTCLDITLEVTSVNILPFEYTNSTGEKPCHKIPLNTLKRRRLKNC
FTEHPLEHVTYGCGASELMVSFSLLYIIVVRILYIFM
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgcaggtcgatatttcatcttttattttgtgttggtgttcgtcgtatgtctg
gctaaagatgctcacatcgtggctagatgggcggagaaattgggcactgagttgtgggaa
ctcgcgaacgaagtggaccggcccgaggaattgctagaaaaatacaaaagcatgaacgtg
cgagttgaagataagtctggagaagagttgatcaacataattagccaaaatgtaggtagg
atgctgcgtcgaaagatggacgcaattacctgcattcgaatagcagccgaagaggctgcg
gagaactgggacccatctctcctagacgacaacttctcctacgtttccagcaaatgtagt
cctgtcatcggtcatgattcagcaaacaagaactcaacaaacaaaaattgtgatattcat
aagaagaatgtgaccgtgttcagagatatggaactgatttcggactcgcatttctacgac
attccggtaaatacgacttactcatcggttcatataccaaccaacgtgtacgatctcatg
caagatgtagctgaagatatcgcgaggactgaaccgttggacgatatatttcgtcagaat
tacgaatctgatccggcattgtcgtggcaatactttggtacagtcactggtgtactccga
caatatcctgctatgcagtggcgaacaaatctcaaagacaccaacgacgatgataatata
aacgataacacaattgatgataatattaataataataacaatgttagcaaaaataataac
gaagacatcgctgatgttaatgataatgatgacaacgatgacgatgattctcctgctaat
gttaataatgatgacgacaacgatgattctcctgttgatcagtacgacgacaatgacgac
gatgataattttcctgctgatcaggacgatgataattcttctgctgatgaatacgactgc
aggttacgtaattggtttatcgaggcggccacatgcagcaaggatatggtgattctaatg
gacgtcagtggcagcatgacgggctttggaaagacgattgcaaaaacgacagtgaactcg
attctggacaccttatcaaacaatgatttcgtcacactgctaaaatacaataacgagacg
accgaattcgtgccatgttttaaggatatgctgattcaagccactccagaaaatctcgac
acattcaaaaaatccatggacaaaattgatacagataacgtcgccaatctcacggaggct
tttactaaagcattcagtctacttaaaacttatcgagaggaacgcggttgtgacgccgac
tcaccgtgtaatcagctcatcatgcttgttactgacggtgttcctggagggacattggga
aataatctaaaggaggtattcaaaaaatggaattggaatgaaaatagtactcatataccg
gtgcgagtatttacatatcttataggcaaagaagctacaaaaatggatgaactccagtgg
atggtaagatcgtgtctaaatcttggcgactacaagaaagtaaaaactcaggaggaagtg
cgcgaacaagtactcaagtacatttcagtcgtagcgcgtcctttggtacttcagagtgtg
gtacatcctatcgtatggacacatgcttacgctgatatcacgaatccagcacttgccgct
tggctgtggtgggtgatgaagcatgggcaacaaaagtcgctggaaaagtatctgaaagga
aaacggatgggcgtgcaaataaacgagaacgcaatctacatacagcagctgcacaaggat
gagaacattggggaagattcatccacaacctggcaaaagtacagactgttgacttccgta
agcacacctgtatttgatcgtaagagcaatcacagcaacatgacagatgcggcgaatgac
acactgttcggcgtggctggcacagacgtgccgattgatgacatccgcgaacttacgttg
ccatataaactcggcgtgaatggctacgcctttattgtatccaataacggctatgtgata
ttgcatccagacctccggccagattacaaagaccagcttaagttgaactataatagcatc
gatctcacggaggtagagatacttgacgacaaacgcgagcccaggaatccgggacccgaa
ttattggagctgagatcagcgctggtggatcacaagcgaggtaacatgatggggatcccc
gtgaaattacattatgatgacaatcgtcgagtcaaccttgagaaacgtgattatttttat
gcgcccctacctggcactccatttagtcttgcggttgttttatccaattatggaactacg
tggattaaggtcggcgatgagattcgcagaaaccagaacatgaatgtgaatgtgtcggat
tattttgtgggcgatcattggcgtgtacatcctagctgggtatattgtcgttaccattat
ttggaaggtcatgagtttaataagccggaagacgagttgcgtcatttcttagcgctgatg
agccgtcctggttggcgatggtccgagcaatatgaggcttattcatctatagatgaagat
gttgatgaagaacccaactgtggcagacaaacgctcaagcacgatgactactattgcaac
aaagaacttatgcagttgcttgtattcgatgccaaggcgacgaacaacagcttccgtggt
gactatatggagaatttatctccaagggctcgggatctcgcacatcactatggtatcttt
ataagatttatcgcgacccaaagcgggctcaccaggtggcatcatcttaaaaccagtaaa
ctgctgaatgtggatgacagtgttgttttcggtgatcttcatagacgagcagtgaatgaa
ccttggtataaaggcgcgatctttcaaagtgaactagattcagaaagtatttctttatct
gttccatgggaagcaggcgtggacgcgatagtgactgcttcgatgagcctgtcgcccaag
gatggcggcaagaaagcaccagcggctgtagtgggttttcagatgccgatgaaagatctg
tacaagcgattcattgcattaatctcagacaatcagacgacgaatacggtaataaattgc
gcccacaattggattcactgctacctgatagatcaaaatggctacatagtgatctcagac
gaacataatgacaccggacaatttatgggcactcaggagggtgctgtcatgctatccatg
atcaaacagggtctttataatccgatcgacatattcgattatcaagcatggtgtcatgaa
actcgaatcgataactctgccaacagcttaatggaaccgttgcaacatattgcaagattg
ttgctctggtttctgctgaggttgatatggtacgcgacccagtttgtaaacttacccgga
attcatggcaaagtccacttcgatgaagatgcaccagatccgccgccaccaccaaaaccc
tatttttattactattcctgtgatcaaaagcgaactctctatatgttgaacgagaccgtt
gctgctaaaggtgtcaccaatcactccgattactgttcgcggcctttttacgctcagaga
gttgcacatactaatctgttgctagttgtggtggacagcatgtacccaacgtgcttggac
ataacattagaagttacatctgtcaacattttacccttcgagtacacaaatagcacgggc
gagaaaccctgtcacaagattccattgaacactctaaaaagacgcaggctgaagaattgc
tttacagaacatcctctggagcatgtgacttacggctgcggagcatctgaactgatggtg
tctttctcactattatatatcattgttgttaggattctgtatattttcatgtga
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