Trachymyrmex septentrionalis: 108746396
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Entry
108746396 CDS
T11226
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108746396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108746396
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108746396
mRNA degradation factors
5'-3' decay
Lsm complex
108746396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108746396
NCBI-ProteinID:
XP_018338638
UniProt:
A0A195FM71
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MNETNELPPGTASLLEELEKKLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEY
GDIPRGIFIVRGENVVLLGEIDIEKEKVLPLKKVTVDEILDAQRREQESKQEQKKRINKA
LKERGFAYIPDLSHDDMY
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaactaatgagttgccaccggggacggcatcgctacttgaggaacttgaaaaa
aaacttatggttttattgagagatggcagaacgttaattggctatcttaaaagtgtcgat
caatttgctaatatagtacttcaaagtaccattgaaagaattcatgttggtcaagagtat
ggtgacattccgagaggtattttcatagtaagaggggagaatgttgtgcttttaggagaa
atagatatagagaaggaaaaagtattgccgttgaaaaaggtgacagtggatgaaattttg
gatgctcagaggcgcgaacaagagtctaagcaggagcagaaaaagcgaataaacaaagct
ctgaaagagcgaggttttgcgtatataccagatttaagtcatgatgatatgtactga
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integrated database retrieval system
