Trachymyrmex septentrionalis: 108746521
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Entry
108746521 CDS
T11226
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsep04121
]
108746521
Enzymes [BR:
tsep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108746521
Ubiquitin system [BR:
tsep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
108746521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
108746521
NCBI-ProteinID:
XP_018338845
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MPRVNGKDVSNSSHEDAIRCFQLAQEPIIVEVLRRQPNKHQQVPHTPSKIHENITCQDKN
ETTNERGEKICNNDVNKDNTTCNLISTSVQTDWAGLIEVEELFPVPFVVEEQANDSFEDF
LTHDIDFEEVTLRKSDSAEKLGLTVCYSSGSGSEDFDTEVYISEIIPESLAARDGRLREG
DQILQVNGKDVANKEQTENLFAETKNAVTILVSRCVYQDDEYHDRRIYHQDLPSFSLQNL
PYQNSMIEQLIQQQTEERTKNSDVDNCILKAPPPIPSHTQQQQQPPQQQQSSLPQQQQSV
NNFSTNLSSTCSSHSSYKSYKSKNATLPEHRTKECNKQWMQKSLKDCLKRLEDISLCDQQ
SSPLEATPLSVKLIEAYSSHVWSDSEHIYETIPELDSEPIYSSPYEHHQQHWTQQTNYAM
TTQHNGTAKTYLTNGQQNQKWHSSLKSNSSGEEKDSSSAYNTGESCHSNPLTLELHEGKR
DHYKSTLVLCSPKTLQQQKIDCNCPMLPTATFAVTKQSSKNQNVKKSSSSSHHRDRNKPL
LMNFNTMAADTMYTNVANLQQTMMLQQQLFKQALNRKNLMRSKEMFTSGVKKPKSYFQAP
NLTQYQFVGSQQVCTSTTWIPTEDKNEVQMEWKVKRRADGTRYIARRPVRNRILRNRAIK
ITEERAGHTTEDDTMSEMKVGRYWSKEERKRQLERAREHKQRQQELILQQEQQQVQQTND
LLICEHTEDKMSKKPLNIIELSYKKMVRKKTTLDDFTTVQEMLVHGNKVGTDGSGTGGKL
MGLLSVTTV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcccagggtgaacggaaaggatgtttcaaactctagtcacgaggatgcaatacgctgt
tttcaattggctcaagaaccaattattgtagaggtccttagacgacaacccaataaacat
caacaggtgcctcatacgccgtccaagatacacgaaaatattacctgtcaagataagaat
gagacgacgaacgaaagaggtgaaaaaatatgtaacaatgacgtcaacaaggacaatacg
acatgcaatttgatatctacttcagttcaaacggactgggctggacttatagaagtggaa
gaattattcccggttcctttcgtcgttgaagaacaagcaaacgacagtttcgaggatttt
cttactcatgacatcgattttgaggaggtgacgttgcggaaaagcgacagcgccgagaag
cttggactgactgtgtgctatagttctggttccggcagtgaggactttgacaccgaagtt
tatatctcggaaataattcctgaaagtctcgcagcccgagatggacggttacgagaagga
gatcaaattttgcaggtcaatggcaaggatgtcgcaaacaaggagcagaccgagaatctg
ttcgccgaaacgaaaaatgcagtgactattctcgtcagtcgatgtgtatatcaagacgat
gaataccatgatagacgcatctatcatcaggatttgccatcgttttcgctccaaaaccta
ccatatcagaatagcatgatcgagcaactgatccagcaacaaacggaggaacgtactaaa
aacagcgatgtagacaactgcatcctgaaagcgcctccacccataccatctcacactcaa
cagcaacaacaaccaccacagcagcaacaatcgtcgctaccacaacaacagcaatctgtt
aacaacttttctacaaatttatcatccacgtgctcatcgcacagctcatacaaatcatac
aaatccaagaacgcgaccttgccagagcatcgtacaaaagaatgcaataagcaatggatg
cagaaatcgctgaaggattgtttaaaaagactcgaggatatatccctgtgtgatcagcaa
tcgagtccactggaggcaacaccgctgtcagtgaagctcattgaagcgtactcgagccac
gtgtggagtgattccgagcacatatatgaaacaataccagaattagatagcgagccaatc
tactcatcgccatacgagcaccatcaacaacattggacgcagcaaacaaattatgccatg
acaacgcaacataacggaactgcgaagacgtatttgaccaacggccagcagaatcagaaa
tggcattcctccttaaagagcaacagttccggcgaagaaaaagatagctcaagcgcttat
aacaccggcgaatcctgtcacagtaatcctttaactttggaactgcatgaaggtaagaga
gatcattataagagcacactggtattatgctcgccgaaaacgctacagcagcagaagatc
gattgcaattgtcccatgctgccaactgcaacgttcgcagtgacaaagcaatcatcaaaa
aaccaaaacgtaaagaagagctcatcgtcatcgcatcacagagaccgcaacaagcctttg
ttgatgaacttcaacactatggcagccgatactatgtacacgaacgtagcaaatttacaa
caaacaatgatgctccaacagcaactattcaaacaagcacttaaccgcaaaaacctcatg
agatcaaaagagatgttcacaagcggtgtgaagaaacccaagtcgtattttcaggcacca
aatctcacacaataccagttcgtcggtagtcaacaagtatgcacgtctactacttggata
ccaacagaagacaaaaacgaggtgcaaatggaatggaaagtgaagagaagagcagacggg
acgagatatattgccagacgaccagtcagaaatcggatacttcggaacagagcaatcaag
ataacagaagaaagagccggtcacaccaccgaagatgatactatgtcggaaatgaaggtc
ggacgctattggagcaaagaagagcgtaaacgacaactggaacgtgcacgcgagcacaag
caacgtcaacaggaactgatactgcaacaggaacagcagcaggtacaacagactaacgat
ctactgatatgcgaacatacagaggacaagatgtccaagaagccattgaatatcatcgaa
ttaagttacaagaagatggtgcgtaaaaaaacgactctggatgattttaccaccgtccaa
gaaatgttggttcacggaaataaagtgggcacagatggatctggcacgggcggaaaatta
atgggtttactgtcggttaccacggtgtaa
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integrated database retrieval system
