Trachymyrmex septentrionalis: 108746683
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Entry
108746683 CDS
T11226
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsep03009
]
108746683
Enzymes [BR:
tsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108746683
Ribosome biogenesis [BR:
tsep03009
]
Eukaryotic type
Pre-60S particles
Helicases
108746683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
DUF7937
Motif
Other DBs
NCBI-GeneID:
108746683
NCBI-ProteinID:
XP_018339101
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MKTQKWEELDIRLSDSVLETLKQLGFFSMTPVQVACIPLLLNGKDVAAEAVTGSGKTLAF
LIPLLEMLQKRNEKWKTMEVGAIIISPTRELAIQINEILEEFLKRIPLLKQVLLVGGVTL
QKDTEKLKKGANIIVATPGRLKDILSNYINLGLYIKSLEFLVLDEADRLLDLGFSATLDS
ILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPALIVVKEKSNVSTPVNLKNSFTIVQPE
YKLPVMIDFIRSVGFKTKYMIFLPTCACVDYFSRIIQTLLPSINVLALHGKMKSKRYKVF
DKFRYAENGILICTDVMARGIDISEIDWVLQYDPPSTASSFVHRCGRTARIGNEGNALLF
LLETESAYVDFIKRNQKVELRQIERELNEEIVDECLQCMRRMQQRDRLMFDKANRAFVSY
VQAYSKHECNLILQLKDIDLGKLAMGFGLLRMPKMPELKGKHLSSFVGPEIDVNTIPYVH
KERELRRIERLNEYRSTGVWTNNQKRCKQKRAESWSETKKRKLERREKRSKRKERKELKQ
QQFLTISNKKKRKRIINEEDVEQLAKDVALIKKFKKKKISQEEFDMAFQV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacagaagtgggaggagttagatatacgactgagtgattctgtattggaaaca
ctcaaacagttgggatttttcagtatgacgcccgttcaggtagcttgtatacctttatta
ttaaatggtaaagacgttgcggcagaagcagttacaggcagtggcaagacactcgctttt
cttattcctctattggaaatgttacaaaaacgaaatgaaaaatggaagactatggaggtg
ggagcgataataatcagtcctacaagagaattggctatacaaattaatgaaattctagaa
gagttcttaaaaagaattccattgttaaagcaagtattactggttggtggtgtgacgctt
cagaaagatacagaaaagttaaagaaaggagcaaatattattgttgccacacctggtaga
ttgaaagatatcctgtctaattacatcaatttgggcctatatataaaatctttggaattt
cttgtattagatgaggcagatagattattagacttgggattctcggcgactttagatagt
attttaagctatttgccacgtctcagaagaacaggattattttctgccacacaaacgaaa
gagctgcagcaattgatcagagcgggattgagaaatccagcattaattgttgtgaaagaa
aagtctaacgtttccacacctgtaaatttaaaaaacagttttacaattgttcagcctgaa
tataaattgccagtaatgatagattttatacgttcagtaggatttaaaacaaagtatatg
atatttttacctacctgcgcgtgtgtggattatttcagtcggattatacaaacattatta
ccatcgataaatgtacttgccttacacggtaaaatgaaaagtaagagatataaagtgttt
gataaatttcgatatgctgaaaatggcattttaatatgcacagatgtaatggctcgtgga
atcgatatatcggaaatagactgggtgttacaatacgatcctcccagtacagccagcagt
ttcgtacacagatgcggtagaactgcgagaataggtaatgaaggaaacgcattgctattt
cttctagaaacagagagtgcatatgtagatttcattaaaagaaaccaaaaagtcgagctg
cgtcagatagaaagagaattaaatgaggagattgttgatgaatgcttacagtgcatgagg
cggatgcaacaaagggatcgacttatgtttgataaagccaatcgtgcctttgtttcgtac
gtgcaggcgtatagtaaacacgaatgtaatttaattcttcagttaaaagatatcgatttg
ggaaaactagcgatgggtttcggtcttttgagaatgccaaaaatgccggagctcaaaggg
aaacatttgtcgtcttttgttggtcctgaaattgatgtaaacacgataccttatgtacac
aaagaacgtgaattgcgcagaattgaaagattgaacgaatatcggagcactggtgtttgg
acaaataatcagaaaagatgtaaacaaaaacgagcggaatcttggtctgaaaccaaaaaa
agaaagctcgagagacgagagaaacgaagtaaacgaaaggaaaggaaagaattgaaacaa
caacaatttttgacaatctctaataaaaagaagagaaaacgaataataaacgaggaggat
gttgaacaattagcgaaagatgtagcattaataaaaaaatttaagaaaaagaagatatcg
caagaggaatttgacatggcttttcaagtatga
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