KEGG   Trachymyrmex septentrionalis: 108746792
Entry
108746792         CDS       T11226                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
tsep  Trachymyrmex septentrionalis
Pathway
tsep03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tsep00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108746792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsep03009]
    108746792
Ribosome biogenesis [BR:tsep03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108746792
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st NBCH_WD40 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 WD_LRWD1 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 108746792
NCBI-ProteinID: XP_018339256
LinkDB
Position
Unknown
AA seq 319 aa
MTSFKKINTKVFARTGPELTEDNIYWKKYAPPVLIKEFGPIDYIDFSPVEPHYFATTCSV
RVQLYNPITKLATKTYSKFKEAAYGGCFRRDGKLLCVGGEEAVIKLFNISSNSVLRIFSG
HKAAVHRVFFTADDVHVASFSDDKTVALWDIPSEKQLTSFNEHTDYVRAGAVSPVSSDVL
LSGGYDKIVNMYDARTNKKVFSVNHNAPVESLLFLPTGGIFLSAGGTDIKVWDALAGGKL
VAKITQHHKTVTCLKIASNGHRILSGSLDRHVKVYDAGTYKTLHALDYPNAVLSIGISVS
RTNCLCHYRVKSTVTSILI
NT seq 960 nt   +upstreamnt  +downstreamnt
atgacgtcgtttaagaaaataaataccaaagtgtttgcccgaacaggaccggaattaact
gaggacaatatatattggaaaaaatatgcgcctccagttttaataaaagaatttggtccg
atagactacattgatttttcgccagtagagccacattatttcgcaacaacctgctcagta
cgagtacaactgtataatcctatcacaaaattagctacaaaaacttacagcaagttcaaa
gaagctgcatatggaggttgttttcgtagagatggcaagctgttgtgtgttggtggagaa
gaagcagtgattaaactcttcaacatcagttcaaatagcgtgttgcgaatcttttctgga
cacaaggctgcagtgcacagagttttcttcacagcagatgatgttcacgttgcctcattt
tcagacgataagactgtagctttgtgggacatacctagtgaaaaacaattgacaagcttc
aatgaacatacagattatgtcagagccggcgcagtgagtcctgtatcctctgatgtgtta
ctatccggcggatatgataaaattgtgaatatgtatgatgccagaacgaataagaaggta
tttagtgttaatcataacgcaccagtagaaagtttactcttcttgccgactggaggaata
tttctatcagcaggtgggacagatattaaagtatgggatgctctcgcgggtggtaaattg
gttgcgaaaattacacaacatcataaaactgtaacttgcctgaaaattgcttctaatggt
catagaatactgtctggttcgttggacaggcatgttaaggtttacgatgctggaacatat
aaaactcttcatgctttggattatcctaatgcggttctcagcataggaattagtgtaagc
agaacaaattgtctttgccattaccgcgttaaatctactgtcacatctatacttatttaa

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