Trachymyrmex septentrionalis: 108746792
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Entry
108746792 CDS
T11226
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108746792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsep03009
]
108746792
Ribosome biogenesis [BR:
tsep03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108746792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
WD_LRWD1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108746792
NCBI-ProteinID:
XP_018339256
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MTSFKKINTKVFARTGPELTEDNIYWKKYAPPVLIKEFGPIDYIDFSPVEPHYFATTCSV
RVQLYNPITKLATKTYSKFKEAAYGGCFRRDGKLLCVGGEEAVIKLFNISSNSVLRIFSG
HKAAVHRVFFTADDVHVASFSDDKTVALWDIPSEKQLTSFNEHTDYVRAGAVSPVSSDVL
LSGGYDKIVNMYDARTNKKVFSVNHNAPVESLLFLPTGGIFLSAGGTDIKVWDALAGGKL
VAKITQHHKTVTCLKIASNGHRILSGSLDRHVKVYDAGTYKTLHALDYPNAVLSIGISVS
RTNCLCHYRVKSTVTSILI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtttaagaaaataaataccaaagtgtttgcccgaacaggaccggaattaact
gaggacaatatatattggaaaaaatatgcgcctccagttttaataaaagaatttggtccg
atagactacattgatttttcgccagtagagccacattatttcgcaacaacctgctcagta
cgagtacaactgtataatcctatcacaaaattagctacaaaaacttacagcaagttcaaa
gaagctgcatatggaggttgttttcgtagagatggcaagctgttgtgtgttggtggagaa
gaagcagtgattaaactcttcaacatcagttcaaatagcgtgttgcgaatcttttctgga
cacaaggctgcagtgcacagagttttcttcacagcagatgatgttcacgttgcctcattt
tcagacgataagactgtagctttgtgggacatacctagtgaaaaacaattgacaagcttc
aatgaacatacagattatgtcagagccggcgcagtgagtcctgtatcctctgatgtgtta
ctatccggcggatatgataaaattgtgaatatgtatgatgccagaacgaataagaaggta
tttagtgttaatcataacgcaccagtagaaagtttactcttcttgccgactggaggaata
tttctatcagcaggtgggacagatattaaagtatgggatgctctcgcgggtggtaaattg
gttgcgaaaattacacaacatcataaaactgtaacttgcctgaaaattgcttctaatggt
catagaatactgtctggttcgttggacaggcatgttaaggtttacgatgctggaacatat
aaaactcttcatgctttggattatcctaatgcggttctcagcataggaattagtgtaagc
agaacaaattgtctttgccattaccgcgttaaatctactgtcacatctatacttatttaa
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