Trachymyrmex septentrionalis: 108746965
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Entry
108746965 CDS
T11226
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108746965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsep03036
]
108746965
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108746965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
CSRNP_N
HSP90
Motif
Other DBs
NCBI-GeneID:
108746965
NCBI-ProteinID:
XP_018339628
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MIGTACTLEDACRQAQDMINLASRCWKNTQGQTSLTLTSDKSLSSQKKEQSYSRHSIQSK
LTRLYFEELSKVPHATPDSVLNNLENECDLLGRLVQREGLNTLIVNLYAGNKGYSLAVRN
SDKGNQYDKNSLAETQLMGYEQGELLSCIDNGQLPAMLAEQLESSYSHLFYDGCIIAEVR
DYRRSFPHNRADVHHVLLKPTTQSVLSDVSTLTSDGDWSHEERLMLESHLVAATQGPLCL
DPNPVPTLASTRIKQSKSLLTDHQLMRQAKKFSQVTVNRKRKLEQLAQPEGQTIHDLILK
FRKSENTKRRVLATNTACPPPSLTNPPLLPPSTAIEALRFAKVYERPRESKDCSPQVVEE
YILEPAESQDYIKLSILQRPATSEYLGELYMDKNHQDGERNGSSCRFPLGTRAVVNHYYQ
QFKEIFTEEGRKNVRIKHIVPGQAPRIACTPGMQRAHQQAQQVKAAQLAQQLQQVQSQHS
QHVAQQQIRASFQILSRAQGQLTNLASQVASMKAMTEASTSAQNNLACVDSANMPQVIPQ
NDVTALSSAQSLANGGANASTSVQIDNSAMTVADNTCNGSGILVFQKSAGAINNAAPTNV
PVLQAQLQAGTQNCIGETANQSQSEPPFKKHSNNPAINALVTSLMNSAQQFQQLAAANAA
AAAMNNNTQATNKSNNAAILSLLNSTPANIAQRKVQSQRISLNASIPPRVISHGNVINVP
NTTGQVRVSLSSSALTGQLSCKQQPVKATAVRLARVQDPTSTLGLSMPGLSALLAGTPSA
DNPIPGMNSTSSLLERLTASSSQSSQPASPMTNPSPTNVNLQGVNLTSLPNSINGLQNVQ
VSFPGLSQPITMSLNVSPSTGGTVTPTGVIVSLPISSATNTCTTVSSMVAATVVTTAIAG
STPTVVIANPANVNAHLSLPIAQLIPSGVKGLSQQNRNNNAVALAQGGQAIQLIGSQRQR
FNHMTRQVQSNQVKSAVLSNQLVTVAKTVTASQLILSGNKQVLTPIMAATKPVLMASQTT
PSSQVVPVNKQTLLTKSLHARASTGQCSQQTQSLGVTTLSQQQLQQLLAAQHKVAVATGS
SQNRTQIEAQRNSTSAPGEDPA
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgattggtacagcctgtactttagaagatgcgtgtcggcaggctcaggatatgattaat
ctagcatccagatgttggaagaatacccaaggtcagacttcattgaccttaacatcggat
aaatcattatcctctcagaaaaaagaacagagttactccaggcatagtatccaatccaaa
cttaccagactttattttgaagaactttctaaagttcctcatgcaaccccagattcagtt
ttgaacaatcttgagaatgagtgtgatcttttggggcggttagtgcaaagggaaggttta
aatacattaatcgttaatctttatgctggtaataaaggatactcattagctgtaagaaat
agtgataaggggaatcagtacgataaaaattcattagctgagactcaactcatgggttat
gaacagggtgagctactttcgtgcatagataatggccaattgccagctatgctagccgaa
caactggaatctagttattcacatttattttacgacggctgcataattgctgaagttcga
gattatcgaagatcatttcctcacaacagagctgacgttcatcatgtacttcttaaacct
actacacagagtgtactttcggacgtatcgacacttacgagtgacggagattggagccac
gaagagcggttaatgttagaatcacatctagtggcagctactcaaggtcctctatgtctg
gatccgaatcctgttcccactttagctagtacaagaattaagcagtctaaatcattgctt
accgatcatcaactcatgcgacaagctaaaaaattctctcaggtcacagtaaatcgtaaa
agaaaattagaacagttggctcaaccagaaggacaaacaatacatgacttaatattgaaa
ttccgaaagtccgaaaatacgaaaagaagagtattagcaaccaatactgcctgtccaccg
ccttctcttacaaaccctcctctgcttccaccatctacagcaatcgaagctttaagattc
gcgaaagtatacgaacggccacgagaatcaaaagactgttcgccacaagttgtagaagaa
tatatattagaacctgcggaaagtcaggattatataaagctctcgatcctgcaaagaccc
gctacttccgagtacctgggagaactttatatggacaagaatcatcaggatggagagagg
aatggttcttcttgccgatttccattgggtaccagagctgtagttaatcattactatcag
caatttaaagaaatatttaccgaagaaggtaggaaaaatgtgagaataaaacatattgta
ccaggacaggctcctcgtattgcatgtacaccaggcatgcaacgagcccatcaacaggcg
caacaagtaaaagcggcgcaattagctcaacagttgcagcaggttcagtctcaacactct
caacatgtagcacaacagcaaatccgcgcgtcatttcagattctatcacgggctcaaggg
caactaactaatttggccagtcaagtagcctcgatgaaggctatgacagaagcttctacc
tctgcacaaaataatcttgcgtgcgtggactcggcaaatatgccgcaagttattccacag
aatgacgttaccgcattgagttcagcgcaatctttagccaatggtggcgctaacgcgtcg
acctccgtgcaaattgataattctgcgatgacagtagcagataacacttgtaatggttct
ggtattctggtctttcagaagtcggctggtgctattaataacgcggcacccaccaatgtt
cccgttttgcaagcgcaattacaggcgggaacacagaactgcataggtgaaactgccaat
cagagtcaaagtgagccaccgttcaagaaacattcgaataatccagcaataaacgctctt
gttacttccctcatgaactccgcacaacaattccaacaactagctgcagccaatgctgcg
gctgcagctatgaataacaatacacaagctacaaacaagtccaacaatgccgcgatcctt
agtttattaaatagtactcctgcgaatatagctcaacgtaaggttcaatcccaaaggatc
tctcttaatgcttccataccacctagagttatcagtcatggcaatgtgatcaacgtgccc
aataccactggtcaagtacgcgtgagtttaagctcctctgctttaacgggacagttaagt
tgcaagcaacaaccagtgaaagcaactgctgtaagactcgcgcgagtccaggatcctaca
tctactcttggattatcaatgccgggactttcggctttgcttgctggcacaccgtcggct
gacaatccgatacccggaatgaattcaacttcatcgctgctcgaacgactcaccgcttct
tccagtcagagtagccaacccgcgagtccgatgaccaatccgtctccaactaacgtgaat
ctacaaggcgtgaacctcactagtctaccgaattccatcaacggtctacaaaacgttcag
gtatcgtttccaggcttatcgcaacctattacgatgtcgttgaacgtgtctccaagtact
ggtggaaccgtcacacctactggagtcattgtttctcttcctatatcgtctgccacaaat
acttgtacgacagtatcaagtatggtagccgcaactgttgttacaacagctatcgctggg
agtacgccaacggtagtgatcgctaatcctgccaatgtcaatgcgcatttgtctttacca
atcgcccaattaataccatctggagtaaaaggattatcgcaacaaaataggaataataac
gcagtggctcttgcacagggaggacaagcaatccaacttattggatctcaaagacaacga
tttaatcatatgactcgtcaagtacaatcgaatcaagttaaatcggctgtcttatcgaat
caattggtgacagttgccaaaactgtaacggccagtcagctgatattgtctggtaataaa
caagtattaactcctataatggccgcgacgaaacctgtgcttatggcgtcacagacgacg
ccttcttcccaagtagtacctgttaataaacaaactctattgacaaaatccttacatgct
agggcttctactggtcaatgcagtcaacagacgcaaagtctcggggtgactactttatca
caacaacaacttcagcagctactagctgcacagcataaagttgccgtcgcgacgggaagt
tctcaaaataggacgcaaattgaagctcagagaaattctacgtctgccccaggggaagac
cccgcctga
DBGET
integrated database retrieval system
