Trachymyrmex septentrionalis: 108746984
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Entry
108746984 CDS
T11226
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108746984
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108746984
Factors involved in mRNA localization
Other mRNA localization factors
108746984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
SLED
Motif
Other DBs
NCBI-GeneID:
108746984
NCBI-ProteinID:
XP_018339665
UniProt:
A0A195FLC5
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MTTEKVTLGDALSNVDVLDEFTLPDEQPCIEAQPCSVVYQANFDTNFEDRNGFVTGIAKY
IEEATVHASLNELLEEGLEHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLAPEV
NKLLNFMYFQRKAIERFSGEVKRLCHHEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKS
SVKNDYSTYRRAAQFLKVMSDSQTLQESQNLSMFLATQNKIRDTVKENLEKIAGYEELLA
DVVNICVHMFETKMYLTPNEKHMLVKVMGFGLFLMDSELCNINKLDQKKKLKLDRIDRIF
KNLEVVPLFGDMQIAPFNYIKRSKHFDASKWPLSSSSNSISPQADLMVHLPQIREDHVKY
ISELARYSNEVITTYKECRSDTENRDTAELALRGLQLLSQWTSVVTELYSWKLLHPTDHH
MNKECPQEAEEYERATRYNYTDEEKFALIEVIAMIKGLQVLMARIETVFIDAIRRNIYAE
LQDFVQLALREPLRKAIKNKKDLIRSIIVSVRETCADWHFGVEPLGDPALKGKKDPDNGF
GIKVPRRNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGQYLVQIDQFHKTSFYWS
YLLNFSESLQNCCDLSQLWYREFYLEMTMGRKIQKCQVRHQHNEECSDLITMEKRIQFPI
EMSMPWILTDHILRSKEPSMMEYVLYPLDLYNDSALYALTIFRKQFLYDEVEAEVNLCFD
QFVYKLSEQIFAHYKQLAASILLDKRFRVECVALGAYLLPYPRANRYETLLKQRHVQLLG
RSIDLNKLITQRINADMQKSLDLAISKFESGDITGVVELDGLLQVNRLTHKLLSKWLALD
EYDAMFREANHNVLAPYGRITLHVFWELNYDFLPNYCYNAATNRFVKCRGLQFVQPVHRD
KPPQMSHHYLWGSKQLNLAYSTQYGQYTGFVGPHHFRTICKLLGYQGIAVVMEELLKIVK
TLIQGSLHQFTKTLMEAMPKVCKLPRYDYGSPGVLGYYHAQLNDIVQYPDAKTELFHNFR
EFGNTILFCLLMEQALSQEEVCDLLHAAPFQNILPRPYCKEGEKPETKQKRLEAKYAALQ
IVPNVDKLGTAKQAMIAREGDLLTRERLCCGLSIFEVVLSRLRSFLDDPIWVGPPPANGV
MNVDECTEFHRLWSALQFVYCIPVGDTEFTVEELFGEGLHWAGCAMIVLLGQQRRFEALD
FCYHILRVQRVDGKDENVKGIHLKRMVDRIRRFQVLNSQIFAVLNKYLKSGDSDAASVEH
VRCFQPPIHPSLAHAQQHYHAPEYLRQINHQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgagaaagtcactctgggcgacgctctgtcgaacgtcgacgtgctcgacgag
tttacgctgccggacgagcaaccctgtatagaggctcaaccatgttccgttgtgtaccaa
gcgaacttcgacaccaatttcgaggacagaaacggttttgtgacgggtatcgccaagtat
atagaagaggcgactgtacatgcgagtttgaatgagttgctagaagaaggcttggagcat
gcagtcatgttatatacttggagatgctgttcgcgagcaattccgcagccaaaatctaat
gagcagccaaaccgagtggaaatctatgagaaaacagttgaggtgttagcacctgaagta
aacaaattgctgaattttatgtattttcaaagaaaagcgattgagcgattttcaggggaa
gttaaacgattgtgtcatcatgagaaaagaaaagattttgtatctgaggcatatttgttg
accttagggaaattcatcaacatgtttgctgttttggacgaattgaaaaatatgaaatct
agcgtaaagaatgactattccacatacaggagagctgcacaatttttaaaggtgatgtcg
gactctcaaacattacaagaatctcagaatctgtcaatgtttttggcaacacagaataaa
attcgtgatacagttaaagaaaatctcgagaaaattgcaggatatgaagaattacttgcg
gatgtagttaatatctgtgttcatatgtttgaaactaagatgtaccttacgcctaacgag
aagcacatgttggtgaaagtaatgggctttggtttatttttaatggacagcgaattatgt
aacattaataagcttgatcaaaagaaaaaattgaaattggatagaatcgatagaatcttt
aagaacttggaggtagtaccattgttcggagatatgcaaattgcaccgtttaattatatc
aaacgttcaaagcactttgatgcttcaaagtggccactgtcttcgtcatcaaatagcata
agtccgcaagccgatcttatggtacatcttcctcaaattagagaagatcacgtaaagtat
attagtgaattggcaagatatagtaacgaagtcattacaacgtataaagaatgtcgaagt
gatacagaaaatcgagatactgcagaactagcattacgtggattacaattactttcgcaa
tggactagtgttgtaacagagctgtatagttggaagctattgcatcctactgaccatcac
atgaacaaagaatgtccgcaggaagctgaagaatatgaaagagctacgcgatataattat
actgatgaagagaaatttgcccttatagaagttatagcgatgattaagggattgcaagta
ttaatggcacgaatagagactgtttttattgacgcaatacgtaggaatatatatgctgag
ttgcaagattttgtacaacttgcattgcgtgaacctttaaggaaagctatcaaaaataaa
aaggatttgattcgaagtataattgtttccgttagagaaacttgtgcggattggcatttc
ggagtagaaccacttggagatcccgctttaaaaggcaaaaaagatccagacaatgggttc
ggcattaaagtcccgcgaagaaacgttggaccgtcttccacacaattgtatatggtgcga
accatgttggaatcattaatagccgacaaaagcggtgggaaacgtactctgaggaaagac
attgatggtcaataccttgttcaaatcgatcagttccataaaactagtttttattggagt
tatcttttaaatttcagtgaatctctacaaaattgttgtgacttgtcgcaactatggtac
agagaattttatttggaaatgacaatgggtaggaaaatacagaaatgccaagtacgtcat
cagcataacgaggagtgcagcgacctaatcaccatggagaaacgcattcagtttcccatt
gaaatgtctatgccatggatattgactgatcatatattaagaagcaaggaaccgtcaatg
atggaatatgttttgtatccattggatttatataatgacagcgccttatacgcactgacg
atatttcgcaaacaatttttgtacgatgaagtggaagccgaagtgaatctatgcttcgat
caatttgtttacaaacttagtgaacagattttcgcgcattataagcaactggcagccagt
attctgttggataaacgattcagagtggaatgtgtcgctctcggagcatatttactccca
tatccacgtgctaatagatacgaaacgttgttaaaacagaggcatgttcagctattggga
agaagtatcgatttaaataagcttataacacaacgcattaatgcggacatgcaaaaatca
ttagatttggccattagcaaattcgaatccggcgatataactggagtcgtggagctagac
ggattgttgcaagtcaatcgccttacgcataaacttctgagtaagtggctcgcgttagat
gaatatgatgctatgttcagagaagcgaatcataatgttttagccccatacggaagaatt
actcttcatgtattctgggaattgaattacgactttttaccaaattattgttacaacgcc
gccacaaatagatttgtcaagtgtcgcggtctacaatttgtacaacccgttcatagagat
aaaccgcctcaaatgtcgcaccattatctctggggtagtaagcagttaaatctggcttat
agtactcaatatggacaatatacaggattcgtcggtccgcaccattttcgtacaatatgt
aagcttcttggatatcaaggaatagctgtggttatggaagaactcttgaagatcgttaag
accttgatccaaggaagcctgcatcaatttacgaagactttgatggaagctatgcctaaa
gtctgcaagcttccacgatatgattacggatctcccggagttttaggctattatcacgct
cagttgaacgacattgtgcaatatccagacgctaagactgaattgtttcataattttcgc
gaatttggcaatacgattctattttgtctcttaatggaacaagctctatcgcaagaagaa
gtgtgcgatttgctacacgcagcgccgtttcagaacattttgccgcgaccttactgtaaa
gaaggagaaaaacctgaaacgaaacagaaacgattagaggcgaagtacgcggctttacaa
attgttccaaacgtagacaaattaggtaccgctaaacaagcaatgattgccagagaagga
gatttattaacacgcgaacgattatgctgcggcttgtcgatattcgaagttgtgctcagc
agattacggagcttcttagacgatcctatctgggtcgggccaccaccagcaaatggtgta
atgaatgtagacgaatgcacggaattccataggctttggagtgcgcttcaatttgtatat
tgtattcccgtcggtgatactgaatttaccgttgaagaattatttggtgaaggtttgcat
tgggctggttgtgctatgattgttcttttgggacaacaacgtagatttgaggcgcttgat
ttctgctatcacattcttcgagtgcaacgcgtggatggcaaagacgagaatgttaaagga
atacatttgaagaggatggtggatcggatcaggcgatttcaagtattgaactcacagata
tttgctgtgttgaataaatatttgaaaagcggagacagtgatgcggcaagtgtggaacac
gtacgctgttttcaacctccgatacatccttcattggctcacgcgcaacagcattatcat
gcacctgaatatttacgccaaataaatcatcagtaa
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