Trachymyrmex septentrionalis: 108747003
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Entry
108747003 CDS
T11226
Name
(RefSeq) RNA-binding protein squid-like isoform X1
KO
K03102
squid
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108747003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108747003
03041 Spliceosome [BR:
tsep03041
]
108747003
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108747003
Spliceosome [BR:
tsep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108747003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_DEAH11
NCBP3
Motif
Other DBs
NCBI-GeneID:
108747003
NCBI-ProteinID:
XP_018339707
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MADQQENKDFSDDVAEQNFEKNGEAESGTGGGGGDAVENGQDSQEDRKLFVGGLSWETTD
KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVDPK
KAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQV
VNELLKTPKQTINGKAVDVKKATPKLDGMGGMRGGMMGRGRGARGGRGRGFGGQGGWGQG
YGGGYGGGYGQGGYGGGYDGYGGYDYYGGGYGGYGGYDYSGYGDGYGYGGGNYEGGYAGG
RGGVRGKGGSGYGGKQRGGGGRQNQRHQPY
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagcaagagaacaaggacttcagtgacgacgtagcggagcaaaatttcgag
aagaacggcgaggctgaaagtggtaccggcggtggcggcggggacgccgtggagaatggc
caggattcgcaggaggacagaaaattatttgtcggtggcttgagctgggaaactactgac
aaggaattaagagaacattttagcacttatggtgacattgagagtattaatgttaaaaca
gatcctaacacaggaagatcgagaggttttgcctttattgtctttgcaaaggccgaagct
ctcgataagattatgtcagctggcgatcatgttattaacaataaaaaagttgaccccaag
aaagcgaaagctaggcatggaaagatcttcgtcggtggtctttcaacggaattgtctgat
gacgacatcaagaacttcttctcacaatttggaaacattgtcgaagtagagatgccattt
gataagacaaagaaccaaaggaaaggtttctgctttattacatttgaatctgagcaagta
gtcaatgaacttcttaagacacctaaacagactatcaatgggaaagctgtggatgtaaag
aaagcaacacctaaattggatggaatgggtgggatgcgtggtggaatgatgggtagagga
agaggagctcgtggcggtcggggtcgcggattcggaggacaaggtggatggggacagggc
tacggaggcggttatggcggtggttacggccaaggtggctacggcggtgggtacgacggt
tacgggggatacgattactacggcggcggttacggaggttacggtggttatgattacagc
ggatatggtgatggctatggctatggcggtggtaattacgaaggtggctacgcgggcggg
cgcggtggtgtacgcggtaaaggtggctccggctacggtggcaaacaaagaggaggtggt
ggtcgccaaaatcagaggcaccagccgtactaa
DBGET
integrated database retrieval system
