Trachymyrmex septentrionalis: 108747461 Help Entry 108747461         CDS       T11226                                  Name (RefSeq) collagen alpha-1(XI) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism tsep  Trachymyrmex septentrionalis Pathway tsep04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tsep00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     108747461  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tsep00536]     108747461 Glycosaminoglycan binding proteins [BR:tsep00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108747461 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  108747461 NCBI-ProteinID:  XP_018340443 LinkDB All DBs Position Unknown AA seq 1699 aa AA seqDB search MRLLDHTRGQWRTLRSTWIMLLVHSLFLMLLILSGLQRNAVDAALQDASKNVTDIIEAMG MQEQLFGVRRTESRCRDDTIAYDIMEAAILMAPTNVLFPAGIPQDFSILVVAKPRANEST SEDYSTSVLFTIYGDSGEEQLILSLGRDIKFLYSINPDDRNEPISFDVNTSDGQWHRLGV SIKGDAVTIILDCNRHITKKLRRNVEKTIAGILMIGQQLKGDLYLGSLEMLKIALNPDAA YEICTTFAPDCERESRYGLNYNSSFNEDDYEEENESEDDNRNFLPHGTITNTINGLTSAT KNSTSYEVEITTMVNVYNAESNHQQNYGESTNNPYDEEYIKRYNTRGSPGLRGFPGPPGV PGPSGEKGEPGRDGLPGLPGVSGPPGNVFVVPSLNQQGNEKGPDSQAEMLRQMISQHMLA MRGVEGPMGLTGVQGPDGPPGPQGQKGEPGEIGEPGLRGDQGSSGNPGREGRRGRPGRDG ERGLSGLPGMKGEQGQIGLPGLPGDKGERGSSGKPGESGLPGHEGMQGEDGPPGLPGLPG ELGPRGFIGSRGFPGLPGNPGIPGNEGPPGIKGNVGPLGPPGAPGQSGPTGSIGPPGPQG PPGPIGLVGPQGKPGIPGLSGADGSPGLPGNPGILGTKGEQGPPGLQGPMGFPGVRGVKG DEGQRGLAGERGEKGDRGLEGEKGDTGAKGEPGTTGPQGIPGLEGLEGPKGFEGFRGETG PAGLPGEKGKIGLPGYAGYPGNPGEKGDKGQLGNQGASGDKGERGNNGLQGERGTTGPRG FRGTRGRRGAEGLPGSKGDTGQPGPAGPSGEIGSPGVEGPRGFTGPSGPLGLDGKDGIPG PPGERGPTGESGSPGPPGIPGVIGLPGPPGELGQPGEPGASGSPGAPGEIGIPGEQGKEG PPGPAGLTGLKGSPGPGGLPGFPGERGLSGLPGLPGLKGEMGPIGAQGLSGDKGIQGEPG KDGSPGPEGKQGHKGDEGSIGLKGEKGDPGPVGPIGRDGLPGQRGLPGPPGPVGSPGEDG DKGNVGPPGEKGFKGSQGDIGFPGPQGVQGPRGESGLVGSPGQKGPPGEIGQRGSKGEDG PVGATGPAGSVGSSGLPGQSGVKGEVGDPGTIGPIGPIGIPGERGPRGSKGLKGTDGPTG PEGRQGEKGDDGMQGAPGKPGLEGTQGERGLPGIKGEEGKLGLLGLPGLRGLTGPEGPKG DAGLPGLPGPPGEPGLMGAKGEPGKDGEDGRVGDPGVPGEDGLPGKEGLPGPPGKSGPEG PAGQQGNTGLPGEKGDIGLPGAPGFEGPVGPQGPPGLSGLPGERGLPGAAGENGIVGMPG AVGAPGIIGPIGSKGQKGDKGRRGIKGYRGESGLIGIKGDHGKRGEKGDRGLPGTQGFKG NPGHPGQVGSRGEQGFVGLPGLPGPSGLKGNAGNEGMRGDVGPAGPPGPPGPPGLSIGQS DFDRIIPSIYRDQSARRKRDAFEDIDEEEMFDKKLSEIKKAFYNIRQELHLMRKPIGTRD NPARTCRDLFYGHPDFKDGWYWIDPNLGMPDDAISVICNITNMGETCIFPDIHSSHMPSI PWRKEDNKTDWYSHLRGGFRISYETIGIVQMNFLRLLSQEAYQNFTYTCTNSVAWYDGEN RSYNLSLRLLGDNGDEFSYNNIRPHLIADECKSRSGKEETVFLIRTSKLQQLPLIDFYPV DYGLPQQAFGFKVGPVCFK NT seq 5100 nt NT seq  +upstreamnt  +downstreamnt atgcggctactcgaccacacgagagggcaatggagaacgctgcgatccacgtggatcatg cttcttgtacattcattgtttttgatgttgctcatcctatccggtttgcagcgaaacgca gtggatgctgcgctgcaagatgcatcgaagaatgtgactgatataattgaagctatgggg atgcaagagcaacttttcggagtgagaagaacggaaagtcgttgcagagatgatacgatc gcgtacgatattatggaagctgcgattctgatggctcctaccaatgtattatttccggcc ggaataccacaagatttttctatcttggttgttgcaaagccgagagctaacgagtcaacg tccgaagattactccacgtcggttctttttactatctacggtgatagtggcgaagaacag ttaattctttcgttggggcgcgacattaaatttttgtatagcataaatccggacgacaga aatgaacctatttcttttgatgtcaatacttccgacgggcaatggcatcgattaggagtt agtattaagggagatgccgttacgattattctcgattgcaatagacatattacgaaaaaa ttgcggaggaatgtcgagaaaacgatcgctggcattcttatgattggacagcaacttaag ggcgatttatatttgggaagtcttgagatgctgaaaattgctctaaatccagatgctgct tacgaaatctgtacaacgtttgcgccagattgtgaacgtgaatcaaggtatggactgaat tataattcatctttcaacgaagatgattacgaagaagaaaacgagagtgaagatgataac cggaattttctacctcatggcacaataacaaatacaattaacggtttgacatcagcgaca aagaattccacatcttacgaagtggaaataacgacgatggtgaatgtgtataatgcggaa tcaaatcatcagcagaattacggagaatcgacaaataacccttacgacgaagaatatata aagcgttataatacccgaggttcacctgggcttcgtgggtttcctgggccgccaggagta cccggtccttctggcgagaagggcgaacccggacgagatggattgcccggattgccgggt gtatctggtccgccaggtaacgtcttcgtggtaccctcgttgaatcaacagggcaacgaa aagggaccggattctcaggcagaaatgttgcggcagatgatatcacaacacatgcttgca atgagaggcgtagaaggcccgatgggtcttacaggtgtccagggtccagatggaccgcct gggcctcaaggtcagaagggagaacctggtgaaatcggcgaacctggacttagaggagac caaggaagttctggaaatcctggcagagagggtaggagaggtcgtcctggcagagacggc gaacgcggtctcagtggactgccaggaatgaaaggagagcaagggcaaataggattacca ggtctaccaggtgataaaggcgagcggggatcctcaggtaaacctggtgaatcaggtttg cctggtcacgaagggatgcagggtgaggacggtcctccaggtttaccaggtctacccggt gaattgggtccgagagggtttattggatcaagaggttttcctggattaccaggcaatccc ggtattcctggaaacgaagggccacccggtattaaaggtaatgttggtccactcggtcca cccggtgcaccgggacaatcaggacctacaggttcaataggaccacctggacctcagggt ccaccagggccgatcggtttagttggtccacaaggaaagccaggaattcctggtctttcg ggtgctgatggatctcctggacttccaggcaatcctggaattctagggacaaaaggcgag caaggtccaccgggtttacagggaccgatgggatttccgggtgttcgaggtgtaaagggc gatgaggggcaacgtggtctagcgggtgaacgcggtgaaaaaggtgatagaggtttggaa ggcgaaaagggcgacaccggagcgaaaggagagcccggaacaacaggtccgcagggcatt cctggccttgaaggtttggaagggccgaaaggttttgagggatttcgtggtgagactggg cccgctggtttgcctggagaaaaagggaagataggcctaccagggtacgctggttatcct ggaaatcctggagaaaaaggggacaaagggcaactaggaaatcaaggagcaagcggtgat aaaggagaaagaggaaacaacggattacaaggagaacgaggtacaacaggcccacggggt tttagaggaactcgtggaagaagaggtgcggaagggttaccagggtcaaaaggcgacact ggtcagccgggccccgctggaccgtcaggagagatcgggtctcctggtgttgaaggtcca cgtggattcacgggaccatcgggtccacttggtctcgatggaaaagacggtataccaggt ccacccggtgagcgtggtccaactggtgaatcaggatctccaggacctccgggaattccc ggtgttattggtcttccaggaccacctggagaacttggtcaaccaggtgagcctggagca tctggcagtccaggagctccgggtgaaatcggtataccgggtgaacaagggaaagaaggg ccgccgggtccagccggcttgacaggactcaaaggatcaccgggtcctggcggattacca ggatttccaggtgaaagaggtctaagcggtttaccgggattgcctggcttgaagggtgaa atgggacctattggagctcaaggactgtccggtgataagggtattcaaggagaacccgga aaagacggatcaccaggtccagaagggaaacaagggcacaaaggagatgagggttccatc ggcctcaaaggcgaaaaaggtgatcctgggccagttggacctataggtcgtgacggtcta ccgggacaacggggtttaccaggcccacccggaccagttggttctccgggcgaagacggc gataaaggaaacgtaggtccacctggtgaaaaaggattcaaaggatctcaaggggacata ggttttccaggtccgcaaggagtacaaggaccacgtggtgaatctggcttggtaggttct ccaggacagaaaggaccaccgggtgagattggacagcgagggtcaaaaggcgaggacggt ccggtcggagcaactggacctgctggatctgtaggatcgagtggtttaccaggtcaatca ggtgtaaaaggtgaagttggagatcctggaactattggtcctataggtcctataggaatt ccgggcgagcgaggtccaagagggtccaagggccttaagggtacagatggtccgaccggt ccggagggtcgtcaaggcgaaaaaggagatgatggaatgcaaggagctcccggaaagcca ggactagagggaacacagggagaaagaggtctaccaggaataaaaggagaggaaggtaaa ttaggacttcttggacttcctggactacggggattaactggtcccgagggaccaaaaggt gatgctggattacctggtcttcctggtccgcctggagaacccggtctcatgggcgcgaaa ggcgagcctggaaaggacggcgaggatggacgagtaggtgatcctggcgtaccaggcgaa gatggattacctggcaaggaaggattaccgggtcctcctgggaaatcgggtccggaagga cctgcgggtcagcaaggtaatacaggtttgccaggagagaaaggagatatcggtctccct ggagcgccgggttttgaaggacctgtcggacctcaaggtcctcccggtttgtctggctta ccaggcgaaagaggtttgccaggcgcggctggggaaaatggtattgtaggtatgccggga gctgttggagctcctggaattattggaccgattggttcaaaaggccagaaaggtgataaa ggtcgtagaggaattaaaggatatcgaggcgaatcgggactgattggaattaaaggcgat catggaaagcggggagagaaaggtgatcgcggacttcctgggacacaaggatttaaagga aatcctggacatcctggtcaggttggatctagaggagaacaaggattcgttggtctaccc ggactaccgggaccgtctgggctaaaaggtaatgctggaaatgaggggatgcgaggtgac gtaggtccggcgggtccgccaggcccaccaggaccgcctggcttgtcaataggacaatcc gattttgacagaataataccatcgatatatcgtgatcaatcagccagaagaaaacgtgat gctttcgaggacatcgatgaagaggagatgtttgacaaaaagctttcagaaataaagaaa gctttttataatatacgacaggaattgcatttaatgcgtaagccaattggtaccagagat aatccggcgaggacatgcagagacttgttttacggacatcccgattttaaggatggttgg tactggatcgatccaaatttgggcatgccagacgatgctattagtgtgatttgtaatatc acgaacatgggcgaaacttgcatctttccagacattcacagtagtcacatgccgagcata ccgtggaggaaagaagacaataaaaccgactggtactcgcatttacgtggaggatttaga ataagttacgagacaatcggaattgtgcagatgaacttcttacgtctacttagtcaagaa gcttatcagaattttacgtatacgtgcacgaacagcgttgcttggtacgatggcgagaat cgcagttacaatctctcgctgcgattactcggcgacaacggggacgaattctcgtacaac aatatcagacctcacctcatcgcggacgagtgcaagagccgaagtggtaaagaggagacc gtgttcttaattcgcaccagcaagttacagcagctaccgctgatcgatttttatccagtc gattacggattaccacaacaagctttcggcttcaaagtcggcccagtttgtttcaaatag

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