Trachymyrmex septentrionalis: 108748275
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Entry
108748275 CDS
T11226
Name
(RefSeq) transcription factor collier
KO
K09103
early B-cell factor
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsep03000
]
108748275
Transcription factors [BR:
tsep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108748275
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
108748275
NCBI-ProteinID:
XP_018341825
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPI
EIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYE
GQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNA
GNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPSEYNSLYPPI
PLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSEFITPHAIKVQAPAR
QIPGVVDVTLHYKSKQFCKGAPGRFVYVSVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEI
VLKRAADLAEAIYSMPKSGNMGIAGAPRSPGSVHAPAPPTSSSATAFNSYTGQLAVTVQE
NGSAAKWTDDGSSVTTGAAADGGGGGGGGGGGSGGSVGTNVGGSADAYRQSSSASPRGVV
TGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNMNPFMLPTCNQG
YSAAASPLLSSNGK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagatactgaaggaggaacctgtgccacgtgcttggccgcagcccgcgctcgcc
gacaatggaacggttggcgtgggccgggcgcatttcgagaaacaaccaccgagtaacctg
aggaagagcaattttttccatttcgtaatcgctctttatgatcgacatggccaaccaatt
gagatcgaaaggacctcattcatgggcttcgtcgaaaaggatcaggaatctgaaggtcaa
aagacgaacaatggtattcagtacagtctacatctgctctattctaatggtgtcaggcaa
gtgcaggacatctatgtcaggctaatagactccgcgacgaaacaagcaatcatgtacgaa
ggacaagacaaaaatccggaaatgtgtcgtgttctgttaacgcatgaagtcatgtgcagc
cgatgctgcgataagaagagctgcggtaacaggaacgaaacgcccagcgatcctgtcatt
atcgatcgattcttcctcaagttctttctcaagtgtaaccaaaactgcctcaagaacgct
ggcaatccacgtgacatgagacggttccaggtggtcatatctacgcaagtgggagtggaa
ggaccattactagcggtctcggacaatatgttcgtccataacaacagcaagcacgggcgc
agggcgaaacgtttggaccctagtgatcctagcgaatacaatagtttatatccgccaata
cctctccaaacaccgtgcataaaagcgatatcgcctaatgaaggttggacgtcgggtgga
tctaccgtcataatcatcggagaaaatttcttcgatggattgcaagtagtttttggatca
atgctagtttggagcgagtttatcactccacacgcgatcaaggtgcaggcaccggcgcga
caaatacctggagtcgttgacgttacgttacattacaaaagcaagcaattctgtaaagga
gcacctggtagatttgtctatgtttcggtaaacgaacctacgatcgactacggcttccaa
aggttacagaaactcgttccgcggcaccccggtgaccctgaaaagcttccgaaggagata
gtactgaagagggcggcggatctagcggaagccatttatagtatgcctaagagcggaaac
atggggattgcgggagcaccaagaagtccaggttcggtgcatgcacccgcaccccccaca
tccagttcagcaacagcctttaattcgtacacggggcaacttgcagtgacggtgcaggaa
aatggtagcgcggcaaaatggacggacgacggtagttccgtgacgacaggagctgctgct
gacggtggaggcggcggcggcggcggcggtggcggcagcggtggtagcgtcggaaccaac
gtcggcggtagcgccgatgcctatagacaaagcagcagcgcaagtccacgtggtgtcgta
accggtggtggttattgcggtagttcagccagcacaccacacagtcacagtactaacgga
agttattctgtcgccaatccgtataccggcagtccaactctctacacctcacgactagga
gaggtggttggatcaccattcaatatgaacccatttatgttgcccacctgcaatcaagga
tactcagccgctgccagtccgctgctttcgtcaaatggcaaatag
DBGET
integrated database retrieval system