KEGG   Trachymyrmex septentrionalis: 108748488
Entry
108748488         CDS       T11226                                 
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tsep  Trachymyrmex septentrionalis
Pathway
tsep03420  Nucleotide excision repair
tsep03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tsep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108748488
   03460 Fanconi anemia pathway
    108748488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsep03032]
    108748488
   03400 DNA repair and recombination proteins [BR:tsep03400]
    108748488
DNA replication proteins [BR:tsep03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    108748488
DNA repair and recombination proteins [BR:tsep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108748488
SSDB
Motif
Pfam: ERCC4 SAM_KSR1 MAS20 DNA_ligase_A_N
Other DBs
NCBI-GeneID: 108748488
NCBI-ProteinID: XP_018342190
LinkDB
Position
Unknown
AA seq 870 aa
MLEYENQIFLDIVQEDGLVITAKGLGIETVFANVIKAYLDPGNLVIVLGTTDYDERYFID
LLKSYGTSRLPFVVNAECSSNEREIMYLEGGVLFISGRILVVDLLKNRVPLHLVTGILVY
RAHNILNAYQEAFALRLYRQNNKTGFIKAFTSSSLAFTVGFSKVERVMKALFVKRLYLWP
RFHATINNCLSKHEPEVIELHVHITPKMQSIQSTLLDVMNYVVKELKRLNKYLDLDEMTV
ENAIAKKFHKQLHLQIDPIWHQLSTTTKQLFSDLKTLRSLIISLTYEDSVSFYAMLNRLR
TMEYAMKAGGWIMLDEFENLFKYARSRVYTEKNELKPESNPKWEALSEVLFEIQEQKHKK
KDYENIDKVLILVHDNYICRQLKNYLTMGANEYLLYEALKKLSHKEQKTSDDSRKKMKDQ
PSTSESNTDEETEDTQDTYVLTLSQKCVEGTQSSTSTEEEIKHQTLFEECSQLAELDLTR
EHYAASAPIVFIQAIKKGGDPMALQRMLTEHIPNNIILYANDIGIVRQLEIYQNNNPSLD
LKVYFLIYGGSIEEQEYLTSLRREKEAFESLITTKITMVVPEDQDGKSDDCLAFAIQSDD
ANQENTRKGGKQSEVKIIPKVIVDMREFRSELPAILYTRGIRIEPVTLVVGDYILTPEIC
IERKSISDLIGSLLSGRLYNQAVSMTRHYAKPMLLIEFDQNKPFCFQGNYYVSKDLKSND
IMAKLQLLTLHFPKLKIVWSPSPHATAQLFEELKQGRDQPDSNIAAKIGADEDTENKQIL
VEKYNPHIQDFIGKLPGVHSKNLRVLLNKGKSLDHLIKLSQEELKEILGNKNDAELLYKA
LHEKCLTDEGPGTSKVSKVRGKRLFSRVKK
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgttggaatatgaaaatcaaatctttcttgacattgttcaggaggatggattagttatt
actgctaagggtcttggtatagaaactgtttttgcaaatgtgataaaagcttatttagat
ccaggaaatctagtaatagtcctgggaaccactgattatgatgaacgttattttattgat
ctgcttaaaagttatggaacaagtagattaccatttgtagtcaatgcagaatgttcttct
aacgaaagggaaataatgtatttggaaggtggagtgctctttatatcaggtcgtattttg
gtagtagatttgttaaaaaatagagttccattgcacttggtcactggcattctcgtctat
agagctcacaatatactaaatgcttatcaagaagcatttgcattgcgtttatacagacaa
aataataagactggatttatcaaggcattcacaagttcgtcactagcttttacagttgga
ttttcgaaagtagagcgggttatgaaagctttgttcgttaaaagattatatttatggccg
cgtttccatgcaacaattaataattgtttgtctaagcatgaacccgaggttatagaatta
cacgtgcatattacaccaaagatgcaaagcattcaaagtactttgcttgatgttatgaat
tatgttgtaaaagaattaaagaggctcaataaatatttagatttagacgaaatgactgtg
gaaaatgcaatagcaaagaaatttcacaagcaattacatttgcaaatagatccaatttgg
catcagcttagtacaacgaccaaacagttgttttctgatttaaaaacattacgttccctt
attatatctttaacgtacgaagattctgtttcattttatgccatgctaaatcgtttacgg
actatggaatatgctatgaaagccggtggttggataatgttggatgaattcgagaatcta
tttaagtatgccagaagcagagtttatacagaaaaaaatgaattgaaaccagaatcaaac
ccaaaatgggaagctttatcagaagttttgtttgagattcaagaacagaaacataagaaa
aaagattatgaaaatattgataaagttcttatcttggtacacgataattatatatgtcgc
caattaaagaattacttaaccatgggtgcaaatgaatacttactttatgaagctctgaaa
aaattatcacataaagaacaaaaaacaagtgacgatagtagaaagaaaatgaaagatcag
ccatcaacatctgaaagtaacacagatgaagaaacggaagacactcaagatacttatgtg
ctcactttgtcacaaaaatgcgtagaaggaactcaatccagtacttctacagaagaagaa
ataaaacatcagacattgtttgaagaatgttcgcaacttgcagaattggatttgactaga
gaacattatgcagcatctgcacctatcgttttcatacaagccataaaaaaaggaggagat
ccaatggccttacaacgaatgttaaccgagcatatcccaaacaatattattttgtatgca
aacgatatcggtattgtgagacaattagagatatatcagaataataatccgtcgttagat
ttgaaagtgtattttttaatatatggtggatcgattgaggaacaagaatatcttacttct
ttacgacgagaaaaggaagcatttgagtctttgattactacgaaaattaccatggttgta
ccagaagatcaagatggaaaatcagatgattgtttggcttttgcaattcaatcagatgat
gcaaatcaggaaaatacgcgtaaaggagggaaacaatctgaagtcaaaataattccaaaa
gttattgtcgatatgagagaatttagaagtgagttaccagctattctctatacgcgcggt
ataagaatcgaaccagtgacattagtggtcggtgattatattttaacaccagaaatatgt
attgagagaaaaagtatatctgatttaattggttctttactttccgggagattgtataat
caagcagtttctatgacaaggcactatgctaaacccatgcttctcatagaatttgatcaa
aataaaccattctgttttcagggaaattattatgttagtaaagatcttaaaagtaatgac
ataatggcaaaactgcaattattaactcttcattttcctaagttaaaaattgtatggtct
cccagtccacatgctacagcgcaattgtttgaagaattaaagcaaggacgagatcagccc
gattcaaatatagctgctaaaatcggagcagatgaagatacagaaaacaagcaaatattg
gtagaaaaatataatcctcacatccaagattttataggtaaattaccaggtgtacattcg
aaaaatttgcgtgttttattaaataaagggaaatcattagatcatcttatcaagttatca
caagaagaactaaaagaaatacttggaaataaaaatgatgctgaattattatataaagct
ctacatgagaaatgtttaacagatgaaggtccgggaactagcaaagtttctaaagtacgt
ggtaagagacttttctctagagtaaaaaaataa

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