Trachymyrmex septentrionalis: 108748554
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Entry
108748554 CDS
T11226
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03030
DNA replication
tsep03410
Base excision repair
tsep03420
Nucleotide excision repair
tsep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108748554
03410 Base excision repair
108748554
03420 Nucleotide excision repair
108748554
03430 Mismatch repair
108748554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsep03032
]
108748554
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108748554
DNA replication proteins [BR:
tsep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108748554
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108748554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108748554
NCBI-ProteinID:
XP_018342281
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Position
Unknown
AA seq
1013 aa
AA seq
DB search
MPRDIRSYFAPVATSQKNSKPVAPKSQKRRIISSSSDEDEEKPQSTKRSTVVKRKKSSIL
SDSEDEERIVRDDKKDSSNPTANKKSKSKESRKAVPFTELFDKKPIMRVEETKMNRKLQK
VESKFHDDEDFDAVLKQLDVVQDTLIQDKQKGKNNIKNVDSPKKSEAAVKTEVASNKNRK
HNNGLKDCNNKTNNTSELKSEEVKSSNKNNVYSKVTNSSSKQNLQKEKKGSSNEDLDISK
KDKDIEKSSRKRAKIMEENLFEERNEMKKQRTIMYEKYLQRGGARNPGSKEIPTGAENCL
AGVSFLITGVLDSLERNEAEDLIQKYGGRTVKSVSNKVNYIIVGDEAGPAKLAKASNLGI
KQISEDDLLEMIRTRSEGKAADIKPTKAKSNVKKIFKKFESDESPNKTKALLDSLKKIKI
LSSLPEKTSVNTKTSSASKQILDVSNDTQKANIVTSIGSEPLVERYRPKTMKQIIGQQGD
KSCAHNLYIWLRDWHQNRQNSKFKDSTSKQTHGQNFKAALLSGPPGVGKTTTVQVVCKEL
GYDLVEFNASDTRNKTLLKEAVSGLLSNTTMKDYVTGIKQKITSKHVLLMDEVDGMAGNE
DRGGLQELVNLIKYTDVPIICICNDRFNTKVKTISTHSYDLKYPRLRVEQIRSSMKSLCF
KENIKISTEDLDRLIESTNYDIRQVINHLEFLGTQMTHVKTTDKKHSNKNFKLGPFDVTK
IAFNADEQKKMSLNDKIGLYFHDYNIAPLFIQENYQGVRLSQISLRQRLERIANAADSIS
QGDLVEKVMRSNMMWSLLPLHACFSFVIPASEMSGSSDGLIRFPSWFGRNSKTTRFNRLL
QELTTHTRLATGANKDALNMDYLPYIRNAIVKPLIDNGLDGIEEAINIMGKYHLTREDLD
SAIEISLWPGMSDSTSNLDSKVKAAFTRAYQKNPPMLPYAINSTTTTKKRSRQDNDIIGE
EEDGEEEETDDIDFDKMIKAKKPTVASTSKAASSTRKRGESAKKCGKVRGKGK
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgccgagggatatcagatcctactttgctccggtcgcgacttcacaaaagaacagcaag
cctgtcgctccaaaatctcagaagcgacggattatttcgtcttcgtcagacgaagacgaa
gagaaaccacagtccacaaaacgttccacggttgtaaaaagaaagaaatcttccatccta
tctgattctgaggatgaggaaaggattgttagagatgataaaaaagattccagcaatcct
acagcaaataagaaaagcaaaagcaaggagtcacgcaaagcggtaccttttactgaatta
tttgacaagaagccgataatgagagtagaagagacaaaaatgaatcgaaaattacagaaa
gtggaatccaaatttcatgatgatgaagattttgatgctgtgcttaaacaattggatgta
gtacaagatactctgatacaggataaacagaagggtaaaaacaacattaaaaatgtggat
agtcctaagaagtcagaagctgcagttaagacagaggtggcttctaataaaaacagaaaa
cataataatggtttgaaagattgcaataataaaactaacaatacgagtgaactaaaatct
gaggaagtaaaatcttctaataaaaataatgtatattcaaaagttacaaattcctcttca
aaacagaacttacaaaaagagaaaaaaggtagttcgaatgaagacttagatataagcaaa
aaagacaaagatatagaaaagtcaagtagaaaaagagccaaaataatggaagaaaattta
tttgaagaaagaaatgaaatgaagaaacagcgtactataatgtacgaaaaatatcttcag
agaggcggtgccagaaatcctggttcgaaagagatccctacaggcgccgaaaattgttta
gccggagtaagtttcttgattactggtgtattggattccttagaaagaaatgaagccgaa
gatttaatacaaaaatatggtggccggaccgtaaaatctgtatcaaataaagtaaattat
attatagtgggagatgaggctggcccagctaaattggcaaaagctagtaatttaggtatt
aaacaaatatctgaagatgatctccttgaaatgattcgcacgagatcagaaggtaaagct
gcagacatcaagccgactaaagcaaaatcaaacgtaaaaaagatatttaaaaaatttgag
agcgatgaatcaccgaacaaaacaaaagcattattagattcacttaaaaagataaaaata
ctatcatctttaccagaaaaaaccagtgtgaatacgaaaacttcatcagcatcaaaacag
attttagatgttagcaatgatacacagaaagcaaatatagtaacaagtattggatcagaa
ccgttagttgagagatatagacccaaaactatgaagcaaattataggtcagcaaggagat
aagagctgtgcacataacttatatatatggctacgtgattggcatcaaaatcgtcagaat
tccaaattcaaagacagcactagcaagcaaactcacggacaaaacttcaaagctgccttg
ctgtccggcccaccgggcgttggtaaaacaacaactgtgcaagtagtttgtaaagaatta
ggatacgatcttgtggaattcaatgcttccgacacgagaaacaaaacacttctaaaagaa
gcggtctcaggattattatccaataccacaatgaaagattatgttacaggtatcaaacaa
aaaattacgagcaagcacgtgctattgatggatgaagtcgacggtatggctggcaacgaa
gatcgtggtggcttacaagaattagttaatttaataaaatataccgatgtcccaattatt
tgtatatgtaatgaccgatttaatacgaaggtgaaaactatttctacgcacagctacgat
ctgaaatatccgaggctcagagtggaacagatcaggagttctatgaagtctctgtgcttt
aaagagaacatcaagatctcaacggaggatctcgatcgtttaatcgaatcgacgaattat
gatattcgacaagtaataaaccatctggagtttctcggcactcaaatgactcacgtgaag
acaactgataaaaaacattcaaataagaactttaagctcggtccattcgacgttacaaaa
atagcattcaatgcagatgagcaaaaaaaaatgagtctgaatgataagatcggtttatat
tttcatgattacaatatagcgcctctttttatacaagaaaattaccagggagttagatta
tctcaaatatcacttcgtcaaaggttagaaagaattgccaacgcggctgatagtatatct
cagggcgacctcgtcgagaaggtgatgagaagtaatatgatgtggagtctacttccattg
catgcttgtttctcattcgttataccagctagtgaaatgtcaggaagctctgacggattg
atacgattcccgagctggtttgggcgaaattcgaagacaacaaggtttaatcgattattg
caagaattgacgacgcatactcgattagctacgggtgcaaacaaggatgccctgaatatg
gattatttgccttatattcgaaatgctattgtaaaacctttgatagataatggtttagat
ggtatagaagaggcaataaatattatgggaaagtatcatttaactagggaagacttggat
tcagcaatagaaatttctctttggccaggaatgtccgattcgacgagtaatcttgatagt
aaagtaaaagcagcgtttacacgcgcatatcaaaagaatcctcctatgctgccgtacgca
attaatagcactactacaacaaagaaaagatctagacaagataatgatattataggagaa
gaagaagatggtgaggaggaagaaactgacgatattgattttgataagatgattaaggca
aaaaaacctactgttgctagtactagcaaagctgcttcatcaacaagaaaacgcggcgaa
tcagctaagaaatgtgggaaagtacgcggtaaaggaaaataa
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