Trachymyrmex septentrionalis: 108748725
Help
Entry
108748725 CDS
T11226
Name
(RefSeq) uncharacterized protein LOC108748725
KO
K03679
exosome complex component RRP4
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108748725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108748725
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108748725
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108748725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108748725
NCBI-ProteinID:
XP_018342522
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MAQYPPINVRLAVNRVDFNLITNDGIQPRLYTPGEEISNQPDFLRGHGTYVDDEKTLRAS
VAGILEKVNKLISIRPLKARYNGEIGDLVVGRITEVQQKRWKVDINAKLDAVLLLSSVNL
PGGELRRRSAEDEQTMRRYLQEGDLICAEVQSIFADGSLSLHTRVLKYGKLSQGIMLKVP
PMLIQRKKTHYHILESGATLILGYNGYVWISANIQNVDKSEGGFTEDLSKIPMENRNVCT
RLRNCILILAQCNMLLSDTSVTYAYEESSKYDWNLETGSRQVASKDMDACFTAFDKDGDG
FLSISEFDLICRALFRNDRGKIYGLEEDQLREVYSIFDLKGDGLIDREEFEVCWNRWIKV
CTRPKSAFLIVDVQNDFITGSLNIKQCAAQHDGSEVIDPINRLLETVPFDAVFYSLDWHP
VDHVSFIDNLHLREVDISSNISKESARVYDTVTFQGPPLLKQRLWPRHCVQDSWGAELHK
DLKIIDKAIKIYKGTNPEVDSYSVFWDNKKLTETTLSSQLQEKGATDIYICGLAYDVCVG
ATAVDALTSGYRTILIDDCSRGVDLVDIEKTKATVIGSNGVIVNSSQVKAMVEGRDRRPE
LGYKLALEIKQKLSLGEE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatatccgcccattaatgtacgtctggcggtaaacagggtagacttcaatcta
ataacgaatgatggcatccagccacggctgtacactcctggcgaggagatatccaatcaa
ccggattttctgagaggccatggaacttacgttgatgatgaaaaaacgttgcgtgcatca
gtcgctgggatcttggaaaaggtgaacaaacttatatcgattaggcccttgaaggcacgt
tataatggagagatcggagatcttgtcgtaggaaggataacggaagtacaacagaagcgt
tggaaagttgatataaatgctaagcttgatgctgttctgttgttgtccagtgttaatttg
cctggtggtgaattgagaagaagatccgccgaagatgaacagacgatgcgcagatattta
caggaaggagatctgatttgtgcagaagtgcaatcaatcttcgcagacgggtcactctcc
ctacatacgcgagtattgaagtatggcaaactatcgcaggggataatgttaaaggtacca
ccgatgttaattcaacgcaagaagacacactatcacattctagagagcggagccactttg
atactcggttacaacggctatgtatggatcagtgcaaacattcaaaatgtcgataaatcc
gagggtggtttcaccgaggatctgtcgaaaattccgatggaaaatcgcaatgtttgcaca
cggttacgtaattgcatcttaatcctggcgcaatgcaacatgctgttatccgatacctct
gtgacgtatgcatacgaagaatcctctaagtacgactggaacttggaaacaggtagtcgg
caagtagcatcgaaagacatggacgcgtgtttcaccgccttcgataaagacggcgacgga
ttcctgtcgatttccgaatttgatctcatatgtcgtgcattgtttcgaaatgaccgcggc
aagatttacggcctcgaggaggatcagctgcgcgaggtgtattcaatctttgatctcaaa
ggcgacggcctgatcgacagggaagagttcgaggtgtgctggaaccgatggatcaaagta
tgcacgcgtcccaaaagcgctttcctaattgtggatgtgcaaaatgattttataacgggt
tctttaaacataaagcaatgcgccgcgcaacacgatggttcggaagtaatcgacccaatt
aatcgattgttggaaactgtaccgttcgatgcagtgttttattccctggattggcatccc
gtagaccatgtatccttcattgataatttgcacttgagagaggtagacatcagcagcaat
atttcgaaagaatcggcgcgggtatacgacacagtaacatttcaaggaccaccattgctg
aagcaacgcctgtggcctcgtcattgcgtacaagattcctggggtgccgagctccacaag
gacttgaagatcatcgacaaagcgatcaagatctacaagggcacgaatccagaagtcgac
tcgtattcggtgttttgggacaacaaaaagctcaccgagaccacgctgtcgtcacagctg
caagaaaaaggcgccaccgatatctatatctgtggattggcctatgacgtttgtgtgggc
gctactgcagtagatgcgctcaccagcggttatcgcactatactgattgatgactgcagt
cgtggcgtggacctcgtcgacatcgagaagaccaaggccaccgtaataggcagcaatggc
gtgatagtgaactccagtcaggtgaaggctatggtggaaggaagagaccgacgaccggaa
ctcggttacaagcttgcattggaaattaagcaaaaattgagccttggtgaagaataa
DBGET
integrated database retrieval system
