Trachymyrmex septentrionalis: 108748867
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Entry
108748867 CDS
T11226
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03030
DNA replication
tsep03420
Nucleotide excision repair
tsep03430
Mismatch repair
tsep03440
Homologous recombination
tsep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108748867
03420 Nucleotide excision repair
108748867
03430 Mismatch repair
108748867
03440 Homologous recombination
108748867
03460 Fanconi anemia pathway
108748867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsep03000
]
108748867
03032 DNA replication proteins [BR:
tsep03032
]
108748867
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108748867
Transcription factors [BR:
tsep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108748867
DNA replication proteins [BR:
tsep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108748867
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108748867
MMR (mismatch excision repair)
108748867
DSBR (double strand breaks repair)
HR (homologous recombination)
108748867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
POT1
CDC24_OB3
zf-AN1
Motif
Other DBs
NCBI-GeneID:
108748867
NCBI-ProteinID:
XP_018342751
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MYNLTEGALEKIMRGVEVDNPVLQILGYKKLPRNVNKDGSATDRFRLLISDGQKLNSFTM
LATQLNNLITENILNDYAICKVTNYHMSSVNNSGKEKRVMLILGIEVLVSGDQVGHKIGN
PTNIEIKSEPESTSTSTSTSTSKATTAHYQNGSARNATSNYQGSSDIYTTPIAALSPYQN
KWVIKVRVTNKAPIKTWSNSRGEGKLFSMDLIDESGEIRCTAFRDQCEKFYDMIETGNVY
YISRCTLKAANKQFCTLKNDYEMTMTGDTEIIPCHENSDDIPTLQFDFCPISQIESKEKN
NLLDVLGVVTTFNDIQQITQRTTGRELLKRDINIVDDSGTMVCVTLWGKQAEDFDGSNNP
IIAIKGARVGEFNGGKNLSLLHSSVLEKDPDLPEAHRLRGWYTAVGHSENIKSLSKTGGG
GDFNAPLYTFEEATEARLGEKMNLADSFTVVATINMIRVENAIYKACPVESCKKKLIDQS
TGVFRCEKCNKDYPNFIYRLLASMNIVDATGSRWITAFSEDAEKILGMSAQELGELKEND
NDAFLQKFGEASFKKFIFTLRAKSEVFQDEMRIKHVCSSVASVNYKTYLTHLIDRVSKLV
HIEKLDSN
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatttaacagaaggagcattggagaaaatcatgcggggcgtagaggttgataac
ccagttctccaaatattgggttacaagaaactgccgagaaatgttaataaagatggttct
gctactgatcgattcagattactgatatccgatggacagaaattaaactcattcacgatg
ttggccactcaactgaacaatctgattacagagaacattttgaatgattatgcgatctgt
aaagtaaccaattatcacatgagttcagtgaacaacagcggcaaagaaaaacgcgttatg
ttgatactgggtattgaagtgttggtttctggtgatcaagttggacacaaaataggtaat
ccgactaatatagaaatcaagtcagaacctgaatctacatctacgtctacgtctacaagt
acatctaaggccacaacagcacattaccaaaatggttcagccagaaatgctacttcaaat
tatcaaggttcttctgacatatatactacgccgatcgcagcattaagcccttaccaaaac
aaatgggtgatcaaggttcgtgtgaccaataaagctccgatcaaaacatggagcaattcc
cgcggagaaggtaagctcttctccatggatctgattgatgaaagtggtgaaattcggtgt
actgcatttagagatcagtgtgaaaagttctacgacatgatagagactggaaatgtatat
tatatctcacggtgcacactgaaagcagcgaacaaacaattttgcacattgaaaaatgat
tatgagatgactatgactggcgatacggagatcataccttgccacgaaaatagcgatgat
attccaacattacagtttgacttctgtcccataagtcaaatagaaagcaaagagaaaaat
aacttattagatgtattgggtgtcgttacaactttcaacgatatacaacaaattacacag
cgaactactggccgagaacttttaaagagagacattaatatcgtcgatgatagtggtacg
atggtatgcgttacattatggggtaagcaagccgaagactttgatggttcgaataatccg
atcatagccattaaaggagcgcgcgtgggtgaatttaatggtggaaagaacttgtctctt
ttacattcctctgtacttgaaaaggatcctgatcttcctgaagcacacagattgcgcgga
tggtacactgcagttggccattcggagaacataaaatcattgtctaaaacaggtggaggt
ggtgatttcaacgcgccattatacacttttgaagaggcgactgaagctcgattgggagag
aaaatgaatcttgcagattcgtttacggtggtggcgactattaatatgatccgcgtggaa
aatgctatctataaggcgtgtcccgtagaaagttgtaagaaaaagttaatcgatcaatct
actggagtctttagatgcgagaaatgtaacaaggactatccaaatttcatttatcgctta
ttggcaagtatgaatatagtggatgcaacaggcagtcgctggataacagcctttagtgaa
gatgctgagaaaatattgggaatgtcagcacaagagttgggagaattgaaggagaacgat
aatgatgcctttttgcagaaattcggcgaggcgagcttcaagaagttcatattcactttg
agggcgaaatccgaagttttccaggatgaaatgagaataaaacatgtatgttcgtcagtc
gcatctgtaaattacaagacttacctgacacatctaatagacagagtctccaagctggtg
cacattgagaaattggattccaattag
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integrated database retrieval system
