Trachymyrmex septentrionalis: 108748923
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Entry
108748923 CDS
T11226
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1 isoform X1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108748923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsep04131
]
108748923
04121 Ubiquitin system [BR:
tsep04121
]
108748923
03029 Mitochondrial biogenesis [BR:
tsep03029
]
108748923
Enzymes [BR:
tsep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108748923
Membrane trafficking [BR:
tsep04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108748923
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108748923
Ubiquitin system [BR:
tsep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108748923
Mitochondrial biogenesis [BR:
tsep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108748923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP8_interact
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-rbx1
U-box
zf-RING_10
PUMA_CC
zf-Nse
zf-C3HC4_3
Spc29
zf-RING_5
zf-ANAPC11
DNA_pol_B_exo1
T3SS_NleG
zf-RING_6
P4Ha_N
SlyX
TBP
DivIC
Trm112p
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
108748923
NCBI-ProteinID:
XP_018342849
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MGFDVNRFQGDVDEELVCPICSGVLEDPVQVSNVLQAPVCEHAFCRTCINEWINRQPTCP
LDRTPITSTQLRAVPRILRNLLARLCIKCDNIMYGCNMVVKLDCLAMHLEQCEYNPKRPM
QCEQGCSLIIPKNELKDHNCVRELRNLIQSQQQKLSDMKRELDEQQLQINEHKREIHLLK
DFMRALRVSNPAMRAIADQMERDDVVRWSASLPRARVTRWGGMISTPDELLQTMIKRTLS
EYNCPPHVIDELMENCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLHCDNM
HMPEDMMVEPGLVMIFAHGIE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgatgtgaatcgcttccagggcgacgtggacgaggagctcgtctgtccgata
tgctctggcgtgcttgaagaccctgtccaggtgagtaatgtgttacaggcaccagtgtgt
gaacatgccttttgccgcacctgtatcaacgaatggataaatcgtcagcctacgtgcccc
ttggatcgtacacccatcacatccactcagcttagagcagttcccagaatcttgagaaac
ctgttggcccgcttgtgtatcaaatgcgacaacattatgtacggttgtaacatggttgtc
aagttagattgcctggcgatgcatcttgagcagtgcgaatacaatccgaagagaccaatg
cagtgcgagcagggttgcagcttgattattcctaagaacgagctcaaggatcacaactgt
gtgcgcgagctccgtaatctgatacagtcgcagcagcaaaaactaagcgatatgaagcgt
gaactcgatgaacagcagctgcaaatcaatgaacataaacgtgagatccatcttctgaaa
gactttatgcgcgcgcttagagtatcaaatccggcgatgcgtgcaatcgctgatcagatg
gaacgagacgacgtcgttagatggtccgcgtctctaccacgcgctagagttactagatgg
ggcggtatgatctccacgcctgacgaattgctgcagacgatgatcaagagaactctgtca
gagtacaattgtccacctcatgtgattgacgagctgatggaaaactgccacgagaggaaa
tggcccccaggtcttaattcactggagactagacagaactctcgacgacaatacgacaac
tacgtgtgcaaaagagtgcctggcaaacaagcggtgctggtcctccactgtgataatatg
cacatgccggaggatatgatggtcgagcctgggttagtgatgatctttgcacatggtatc
gagtag
DBGET
integrated database retrieval system
