Trachymyrmex septentrionalis: 108748924
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Entry
108748924 CDS
T11226
Name
(RefSeq) uncharacterized protein LOC108748924 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04137
Mitophagy - animal
tsep04140
Autophagy - animal
tsep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108748924
04137 Mitophagy - animal
108748924
04148 Efferocytosis
108748924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsep03000
]
108748924
Transcription factors [BR:
tsep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108748924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS
PAS_3
PAS_11
PAS_9
PAS_4
HLH
PAS_2
DUF6586
Motif
Other DBs
NCBI-GeneID:
108748924
NCBI-ProteinID:
XP_018342851
LinkDB
All DBs
Position
Unknown
AA seq
1525 aa
AA seq
DB search
MNNQGIKNMNARLHEVTAEREREESETREEGGNIILDDGRCSQQRGRCSDLPNDWIGKIS
GYTGADAHHMAGGNVIDFPSRELLKPPPLPPPSSYGPAIAFNNVLPSPSITSHVDGSAGS
RACDIETASCSTMRFPYAPGATCDVACSNAPATTCNVARASADCDGPQTTWFRNEAHLAE
PQSGVCTASTTTTSRICQLGPIDVEDLAMYFDSPTDGSKPPPSFGNRAIYSKKSRYGQVA
RMDQSQEHHHRDLNFRDLPSCDLRLVDLTPSDLTSSDLAPNNLQACDMGPSTLGYCDLGN
NDLRFRNSGYDGPPFCDPRLGDPRFCAARLSEEQPREPGRHDPGLGNWFCNDCPELFNFC
SEERWLQCPASDRCPLYDTSYAYDVPVLPPCMYENGYNDNWHYDNTEDEQLLENYLSNEK
RKERSRDAARCRRSRETDIFTELAAALPVAPEQAALLDKASVMRLAIAYLKVRAVVDSIP
VTLTKSESSAKMDELFPKALNGFMLVLSSDGNMVYLSENVRDYLGVSQMDMMGQSVYEYS
HPCDHDELRECLSSKSADNNEKRTCNFFLRLKCTLTSKGRKVNLKSASYKVIHCTGRLTN
IRDSNSNSMEVDNEERRKEDEDVGQDTGTSLVLVGSPIPHPSNIEIPLGRHTFLSKHNLS
MKFTYADEKLAEYLGWSSEELMGRSVFEFYHALDNLTLDKCFKCLFSKGQCETVAYRFLG
KRGGYAWVITQATLIHCSKQQKPISVVCVNYILSGIEHEDEVYSVRQLAARDNDANLVKI
EKPLPVLVPTGSSAVLTTDSSQVSLNDEEKIPVEESTVDDESRSDDRPFAVTASIFRSID
EKGGCKDDSQKDGALPKHARKEKAFVFLEKALKESLEESIKENDVPATVNRQSFAKKTPF
ILQDKPTVVNDSSDSAEHLDRPQSVTRHLFAPLATAVQQQEQQQQQEQEQSQLSCRPQTA
TASIFAPRTEDMNKGFLTFSEDQPGLTMLKDEPEDLTHLAPTAGDVCVPLEDTPFLSDML
DEFIFGNDNYGCPLLSPGDTLTPELRSADLSGSLKDADLVDTTTRAKNAVDRLADSDPFM
YGDSPGSPCGIDPSTVSPSLSKYRQSPERSVDSLGSPTGGSGGDGLSEDEMLMLGISDSI
GDEELALRAPYIPMSDQDEALEFLINDNMVMWSSSQSADKGSSKWLLDDREQRNSESSLA
QLLRTDQAVSRRYNDHGGGLLNSTQILGQTPRKNMLFESDRWSSNQERPNKRIHSGLNTD
SENEYKRLKCENSSFERINLEDTLVTKQQRQSTTLHKKSPPTLGNTCGSQLLRRLVSSQM
PSIVSQVATLPDSNGHIRSDNERHREDFSKQRDSDLDDIIDFVESEGDRGGGGGGGENHG
GIGDGLDKIDATSRRRNPSCATGGSSVLMNLLVSGCDDPLMSSCDMSTVLSSNLTPLSIN
VDNQVVPHCTNTDVISLPDHLSPDTRKHLIGPFTSGSGDRGTPIVSPTTSAMASFDSFDW
IRDGSTGLLQVGSDLLGGLLDRNLV
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaaggaattaaaaacatgaacgcgcgtttgcacgaggtgacagcagaaaga
gaaagagaagaaagtgagacgagggaggagggtggaaacatcattcttgacgacggtcgg
tgctctcaacagcgaggtcgttgctctgatcttcccaacgactggatcggcaagatatcg
ggttacactggtgccgatgcgcatcacatggcgggaggaaacgtgattgatttcccgtcg
cgcgaattgctgaaaccaccaccgctgccgccgccgtcgtcttatggtccagcgatcgcg
tttaacaacgtcttaccctctcccagtattacgtcacacgttgatggtagtgctggatca
cgagcttgcgatatcgagacggcatcttgctccacgatgagatttccttatgcgcctggt
gcgacttgcgacgtggcgtgcagtaatgcaccagcgacgacgtgcaatgtcgctcgagcg
agtgccgactgcgacggtccgcagacaacgtggttccgcaacgaggctcacttggccgag
ccacagtcgggggtttgcacggcgagcacgacgacgacctcgagaatttgccagctgggc
ccaatcgacgtcgaggatctcgcaatgtacttcgattcaccgacggacggcagcaagcca
ccaccctcgttcggtaatcgagcgatctattcgaagaaatcgcgatacggacaggtcgcg
aggatggatcagtctcaggagcatcaccaccgcgatctgaatttccgcgatctaccttct
tgcgatttgcgcttagtcgatctaacacctagcgatctaacatctagcgatctagcgccc
aataatctacaagcttgcgatatgggaccgagtacactgggatattgcgacctggggaac
aacgatctacggtttcgtaattccggttacgacggtccgccgttttgtgatccaagactt
ggcgatccgcgattttgcgctgcgaggctgtccgaggagcagccccgtgaaccagggcga
cacgatccgggactgggtaattggttctgcaacgactgcccggaactgttcaatttctgc
agcgaggaacggtggctgcagtgcccggcgagcgaccgctgtcccctttatgacacctcg
tatgcttacgacgtgcctgttttaccgccatgtatgtacgagaatggttacaacgataat
tggcattacgacaatacggaggacgaacaactcctcgagaattacttgagcaacgagaag
aggaaggaaaggtctcgcgatgcagcgcgctgcagacgtagcagagaaaccgatatcttc
actgaactcgcggctgctcttccggtcgcgccggaacaagcagcgctcttagataaggcc
agcgtaatgaggttggcgattgcctacctcaaagtccgagccgtcgtggattccattcca
gttacgctgacaaaatccgaatcgtccgcaaagatggatgaattatttccaaaagctctc
aacggctttatgttagtactctccagtgacggcaacatggtctacctttcagagaatgtc
agagactatctcggagtgtcacaaatggatatgatgggacaaagtgtatacgaatacagt
catccctgcgaccatgatgaattgcgtgagtgcctgtcttcgaagtcggcggataacaat
gagaaacgtacctgcaacttcttcttgcgactcaaatgtactctcactagcaaaggcagg
aaggtcaatctgaagagtgcttcttacaaggtaattcactgcactggcagattgacaaac
atccgcgactcaaactcgaactctatggaagttgataatgaagagcgacgcaaagaggat
gaggacgtgggacaagacacaggcacttctctagtgctcgtaggtagtcctatacctcat
cctagtaatattgagatacctttgggacgccatacctttttgtcgaagcacaatctcagc
atgaaatttacctacgctgatgaaaaattagccgaatacttgggctggagcagtgaggag
ttgatgggtcgatcagtctttgagttttatcatgcactcgacaatcttacgctggacaaa
tgtttcaaatgcctgttcagcaagggccagtgcgagaccgtagcgtacagattccttggc
aagcgaggcggttacgcctgggttattacccaggccaccctcatccactgctccaaacag
caaaagccgatctctgtcgtctgtgtcaactacatcctaagtgggatcgagcacgaggat
gaggtatacagcgtgcgccagctggccgcgcgtgataacgacgccaatttggtgaagata
gagaaaccgttgccggtcttggtgccgaccggtagtagcgctgtattgacgacggattcg
agccaggtatcgctgaacgacgaggagaagattcccgtggaggaatcgaccgtcgacgac
gagtccaggagcgacgatcgaccgttcgccgtcaccgcgtcgatcttccgttcaatcgac
gaaaagggcggctgcaaagacgattcgcagaaggacggtgccttgccgaaacacgcccgg
aaagaaaaggcattcgttttcctcgagaaggccctcaaagagtctctcgaggagtcgatt
aaggagaacgacgtgccggcaacggtgaaccgacagtccttcgctaagaaaacgcccttt
atattacaggataaaccgacggtggtgaacgattcatcagacagtgctgaacaccttgac
cgtccgcagtcagtcacgagacatctgttcgcaccgctcgcgaccgccgtgcaacaacag
gaacaacagcaacaacaggaacaggaacagtcacaattatcctgtcgtccgcaaacggcc
acagcgagcattttcgcgcctcgtaccgaggatatgaataaaggctttttgactttcagc
gaggatcagccgggtctcaccatgttgaaagacgagccggaagacttgacacatctcgca
cctacggccggtgacgtgtgcgtacctttggaggacactcccttcttgtcagatatgctg
gatgagtttatcttcggcaacgacaactatggctgtcctctattgagcccgggagacact
ctgacaccggagttacgttccgcagatctctcgggatccctcaaagatgcagatctcgtg
gacactactactagagccaagaatgcggtcgatcgtttagccgatagtgatcccttcatg
tacggcgactcgcccggaagtccctgtggcatcgatccgagtactgtgtcgccgtccctc
tcgaagtaccgacaaagtcctgagcgcagcgtggactcattaggtagtcctacaggaggt
agcggcggcgatggactctccgaagatgagatgcttatgttaggtatcagcgatagtata
ggggatgaagaattagcgctcagagcaccctatattccgatgtcggaccaggacgaggcg
ttagagttcctcattaatgataacatggtaatgtggagctcgtcgcaatctgctgacaaa
ggatcctcgaaatggttactcgacgatcgagagcaacgtaattccgaatccagtctggca
caattactacgaactgatcaagcagtatcgcggcgatacaatgatcacggcggaggtttg
ctaaattcaacgcagatattgggacaaacacctagaaaaaacatgcttttcgaatccgat
cgatggtcctctaatcaggaacgtcccaataaacgcattcactccggacttaatacggac
tctgaaaacgaatataagcgtcttaagtgcgagaactcgtcatttgagcgtataaatctt
gaagatactttggtgacgaagcaacagcggcagtcgacaacgcttcacaagaagtcaccg
ccgactctcggtaacacctgtggcagccagcttctgcgtcgcctcgtctcgtcacagatg
ccaagtatcgtatcacaggtggcaactttgcctgacagtaacggccatattcgcagtgat
aacgaacgtcatcgcgaggacttttcgaagcagcgtgatagcgaccttgatgatatcatc
gattttgttgaatcggaaggtgatcgcggtgggggaggaggcggaggcgaaaatcacggc
ggtatcggtgatggcctagacaagatcgatgcaacaagtcggagaaggaatccttcctgc
gccactggcggcagcagtgtgctaatgaatctcctggtttccggctgcgacgatcctttg
atgagttcttgtgatatgtcaactgtgttatcaagtaacctgactccgttatccatcaat
gtggataatcaggtagttccacactgtacgaacacagatgtcatatctttgcccgatcat
ctcagtccggacaccaggaagcatttaatcgggccctttaccagcggtagcggagacaga
ggtactcctatagtctcgcccacgacgtccgcgatggcatctttcgatagctttgactgg
atccgcgatggatccacgggcctgcttcaagtgggatcagatctactcgggggactgctg
gatcgaaatctagtgtga
DBGET
integrated database retrieval system
