Trachymyrmex septentrionalis: 108749098
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Entry
108749098 CDS
T11226
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108749098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108749098
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108749098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR
TPR_MLP1_2
Nucleoprot-TPR
ZapB
YabA
Motif
Other DBs
NCBI-GeneID:
108749098
NCBI-ProteinID:
XP_018343118
LinkDB
All DBs
Position
Unknown
AA seq
2366 aa
AA seq
DB search
MEVIEESDHNILLEIANDEELTQIPRELVRKINVHFNNRFEEFITAKAVFETNRKCLEQN
LEKAQKELAEQKLDLEEYKGKLELTEKNNVEICSNLEEVKIEVHRLQESIKRLEKENSEL
RRQRDIATDEASALQLQVERRDTEIERMRTELSSLSNQLQTAIAAKCRTLADTEEIRSRE
MTLDFKEKRLEQERVLLSQQMAGLEEELARRTSELQTARSESSTRALLIDTKLSQREEEL
RIANEANSQLRESVSSLQKQSDELAQKVEQQRAHEIAINDSYQKEINAQKNLASLYESMK
DDANAKAEALSNAASELQKLVDSTAEEYGTLETKYNQLLVQHKQDIDDKEQNIQELTKEL
ENANELLKNIQQEKLNQAVEQLAPAAAVTSRVLRKGLSLTQIYTQLVEVTNDLNLEREEN
ERLKSQMDVILRELEQKAPLLQQQRQDYETAMANITTLTNRLDDLLAENQRLHENSDEAN
RLAKHHSTENQRLKTELSDLARQVCYLLKEVQESRTNTRMETRNLSSSIDTDDISSSQII
SKKLVTFKDIEELQENNQKLLAIVRALSSRQEEMERATDEINSGEMKEKLDRYMEQLTEM
QAAQDRQSKMLDGLLKQRDMYKNMYQQMKNSSEKKEEVDKDIEEGKSKSEEESKTTKSDE
EKEKLLKKLKEAEDQFKHISGEYEIYRKERTAHEKMLSEEVERLRKEAESNSARCCRLRA
QLDSANERFSLLQGNVASYKSQIKALEEKCTNYNITISKHEQSIMILKDETLAAQTRLSR
AEVQLENLRQERQLLRDTEGRLLKEREVYQRERQTQSLLKADMESIKASLERVQAEGQLR
AEQRLDDANRECAALRRRLQEEQDRFRELAGHLERQLTTAQERLKEERELCERLRIELDQ
ARETETQSSQKIDQLNNKLRQAATHSITKPLTGDEGLVKRVKELEIQLSTSQAEINSLCE
QLKAARQQSQQYCDIAESAETQLRELTAEYNKCKEELENALKESRVEIISLQKRVKELGD
DLAKMSNGRQETDSELRDRLAEAERKIEELDELKGELELLKTDLKSASIAVKEAEDKYTR
EMLQHSSDLQILTKLKEEAQHVQQRLDVLTLERNTAVQALEVEKSTSKEREQKLVNELEE
TQKRSMDLDTQNALLHNQIQELGDRVAIMQSQQTKISGGRDSPDTSLEALNKSFSSLEED
SKSVEQLLRVMKYLRREKDLAIAKTDVLRAENLRLKSQVEVVEKRLKETETSLNSEREKS
EINIMTTSKHAELLRKVETLNAITDSNRILREERDSLSVKVNELTTKVNSLSEEVVPLRD
ISRDLTAKTEALTEENTSLKGEATRWRQRANTLLERANKASPEDWRRLQTERENLSKLLT
SERETHAKRTEEFNQVKTEKAKLEEQLTQLQRQIQTHDEHMSRASEEVRKLGQELNEALA
DSSSKAKDLASLRKELSDKDAILNDVKNKEIQIRKIAKKYKTQFEELAKSVEEEKNRNEE
IRNEDASGVATQERDDQLREEGRQELRQANIELTTKIDEVTRQMVVAQSEADNLRKEIEA
MNRSSIEKEERAKQVLKGARTKIMQLTESKKICEKELLDLKSRIESTGGNAGVQGDSDTE
HDARLVALKSQMEGRMSRLEHEKSEIQAEKEALLQRVAQLQRQLSGVSGVSATTEPPTAN
IKPMSARAETPLASIRPMSVVVQSRTAAVLPTTAGAPVMVAPHQMQQQQVVHTTETSSPT
SSLTDFQPASTSTSSQSAQTSGLRQLVVQPQLSESAESTQREDPESAETLNLQPQQQQCQ
QQQQQQQQTVALVSPRVEQQQQQQQQQQQITVSDQQQTVASSSTQSVSTSQASTGLKRPR
GRDSTASGSGIVEGLDHGRQEQVQSPKTKRTRPDISATASASASEVEYQVPTSSQRDQDE
EVEEGCVVVVDCDEGEGGGNHQAQEEEEFDNDTYEEIEEEEEMPYEVEVEVERDNNEVEI
IMEEDSTSVEISRQGQAIIPANQQQSEAISSAGPTAEPATSFTAVSSRGIAPMPRQQQQQ
HLLLPQQGYEDGGDDCIVPSTPTLFVPRRDGFGEAVSSPQVPQGRFTFGDSSAPTTASST
PSLTTSTGSNTRIFGSTNSAVVQESLDDSRMDLTQLEDGGTGRSVPTTPLQVSPAADLPP
STSSSQSEEQESTVTHVTVTATSGDNIEDSNIPSIHIVGVDDQQRGSTEATESSATPSEG
VSSEGEKREEEPVVLASGEDDAVDTAEATEETGSELVEEEVEEENREAEASPSSNTRQRT
MAANLAAASDANNARGMTVRRSPRSPFPPRARGARPTPIVWGETQSGRGQPVMRGHAARG
AANEGGRGRGTRGRRMRSKYPYARYS
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgatcgaggagagcgatcataacattcttcttgagattgcgaacgacgaggag
ctaacacaaatcccgagagaattagtgagaaagatcaatgtacattttaataacagattt
gaggaattcattaccgccaaggcggttttcgagacgaaccgaaaatgcttggagcaaaat
ttggagaaggcgcagaaagaacttgcagaacagaagttggatcttgaagaatataaagga
aagttagagctcacggaaaagaacaatgtagaaatttgtagcaatcttgaggaagtaaaa
atagaagtacacagattacaggaatctatcaaacgattggagaaggaaaatagtgaatta
cgtagacaaagagatatagccacagatgaggcaagtgcactgcagctgcaagtggaaaga
cgagatactgagatcgaaagaatgcgtactgaattatcatctttaagcaatcagcttcaa
actgctattgcagccaaatgtcgaactctggctgacacagaggaaatccgtagtcgagaa
atgaccttggacttcaaagagaaacgactggagcaagaacgagtgcttctctcccaacaa
atggcaggcctggaagaagagttagctaggagaacgtctgaacttcagacagcaagatct
gaatcttccaccagggctcttttaattgatactaaattatcccagcgcgaggaagaattg
cgaatagctaatgaagccaattctcaactgcgagaatcggtttcttctcttcaaaaacaa
tccgatgaactggctcagaaagtggaacaacagcgtgcccatgaaatcgctataaacgat
tcctaccaaaaagaaatcaatgcgcagaaaaatctagctagcttatacgagtcgatgaag
gatgatgctaatgctaaagctgaggcactttctaatgcagcaagcgagctacagaaactt
gtggatagcaccgcggaagaatatggaaccttagagacaaaatacaatcaattactggtc
cagcacaaacaagatattgatgacaaagaacaaaatatccaggaattgacaaaagagtta
gaaaatgctaatgaattattgaagaatattcaacaagagaaattaaatcaagcggtagaa
caattggcaccagcagcagctgtaaccagtcgagtgttacgaaaaggtttaagccttacg
cagatttacacccaactagtcgaagtcaccaatgacttaaatttagagcgtgaagaaaat
gaacgcttgaagtctcagatggatgtaattcttcgcgaactggaacagaaggcgccgtta
ctgcagcaacaacgtcaagattatgaaacggctatggcgaatattacgaccctaacaaac
aggctggacgatcttctcgcagagaatcaacgtcttcatgaaaattccgatgaggctaat
cgtcttgccaagcatcactctacagaaaatcaaaggctgaaaactgaattgtctgactta
gctagacaagtatgctatctgctcaaagaagtccaagaaagtcgcaccaacactcgcatg
gaaacgagaaatttgtcttcatccatagacacagatgacatctcgtcgtcgcaaatcatt
agtaaaaagttggtaacgtttaaagatatcgaggaattgcaagagaacaatcagaagctt
ttagcaattgtccgcgcattatcatccagacaagaagaaatggagcgagccactgatgaa
ataaattcgggagaaatgaaggagaagctggatcgttacatggaacaattgacagaaatg
caagctgcgcaagataggcagtcgaagatgttggatggtcttttaaagcagagagacatg
tataaaaacatgtatcaacaaatgaagaattccagtgaaaagaaggaggaagtggataaa
gatatcgaagagggcaaatccaaatcagaagaggagtcaaagacaacgaaaagtgatgaa
gaaaaagaaaagttgctcaagaaattaaaggaggctgaagatcaatttaaacatatttca
ggtgaatacgagatatatcgcaaagaacgaactgcgcatgaaaagatgttgagcgaagaa
gttgaaagacttagaaaggaggcagaatcgaattcagcgaggtgttgcagactgagagcg
cagttggactcagcgaatgagagattctcacttttgcagggtaatgtcgcttcatacaaa
tcccagatcaaggcacttgaggagaaatgcactaattacaacatcaccattagcaaacat
gagcaaagtattatgatattaaaagacgagacactcgccgctcaaactcgcttatctcga
gcggaagttcaactagaaaatcttcgtcaggaacgtcaacttttgcgagacactgaggga
cgtctcttaaaggaacgggaagtttaccaaagagaaagacagactcaatcattgcttaag
gcagatatggagtctattaaggctagcttggagcgagtccaagctgaaggacagcttagg
gccgagcagagactcgatgacgccaacagggaatgcgctgctcttcgacgtcgtcttcag
gaagaacaggaccgcttcagagaattggcgggtcatttagagagacagttgacgactgct
caagaaagactgaaagaagaacgcgaattatgtgagagattgagaatagagttagatcaa
gcgagagagactgaaactcagagtagtcaaaaaattgatcaattaaacaataaattaaga
caagcagctactcattccatcactaaacctttgacaggtgatgaaggtcttgtgaagagg
gtaaaggagttggaaatacaattgagtacctctcaggctgaaataaattcgctctgcgaa
cagttaaaagcagcaagacaacaaagtcagcagtattgtgatattgcagagagtgctgaa
acgcagttgagagagttgacagctgaatataacaaatgtaaagaagagctggagaatgct
cttaaagaatcacgtgtggagatcatttcattgcaaaaaagagtgaaggaattgggtgat
gatctggcgaagatgtcaaatggtaggcaagaaaccgattcggagctgagggatagattg
gctgaagctgagagaaagattgaagaactcgacgagttgaagggtgaattggagttgtta
aagacagatctgaaatctgcctctatcgctgtcaaagaagcagaagacaaatacaccaga
gaaatgctgcaacattcgtccgatttacagattttgacaaagttgaaagaggaagctcaa
catgttcagcagcgacttgatgttctgactttagaacgaaatacagcagtacaagctttg
gaagttgagaaatcaacctcaaaagaaagagaacagaagcttgtgaatgagcttgaagaa
actcaaaagagaagtatggatcttgatacgcagaatgcacttctgcacaatcaaattcaa
gagttgggtgatcgagtagccatcatgcagagtcaacagacaaaaattagcggcggaaga
gacagtcctgatactagcctggaagctctaaataagagtttcagctctttggaggaagat
tccaaatcagttgaacaattgttgagagtcatgaaatatttaagaagagagaaggatttg
gccatagccaaaactgatgttcttagagctgaaaatctcagattaaaatcacaagtcgaa
gtagtggagaagcggttgaaagaaactgaaacttcgctaaattccgaacgagagaagtcc
gagattaatataatgaccacatccaagcatgcagaattgttgcgcaaggtggagacctta
aacgccatcacggattctaatcgaattctcagggaagaaagagatagtctcagtgtgaaa
gtcaatgaacttacaaccaaagtgaactctttatcagaagaggtagtacctcttcgagat
atatccagagatttgacagccaaaacagaagctttgacagaagaaaacactagcttgaaa
ggcgaagcaaccagatggaggcaaagagcaaatacgttattagaaagagcgaataaggcc
agtcctgaagactggcgacgacttcaaactgaaagagagaacctgagtaaattgttgacg
tcagagagggaaactcatgcaaagagaactgaagaatttaatcaagtgaaaacagagaag
gcgaaactcgaggagcaactgacgcaattgcaaagacagatacaaactcacgatgaacat
atgtcacgagcatcagaagaggttcgcaagctaggtcaggagcttaatgaggcactagcc
gattcttcttcgaaggcgaaggatttggcttcccttaggaaggagctaagcgataaggat
gccattcttaatgatgttaaaaacaaggaaattcagatccgcaaaatagctaaaaaatat
aaaacgcaatttgaggaactcgcgaaaagcgtcgaggaagagaagaatcgtaatgaagaa
atcagaaacgaggatgcttcgggtgtggcaacacaagaacgcgatgatcaactgcgagag
gaaggccgccaggaacttcgccaagcgaacatcgagctcacgacgaagatagatgaggta
actcgccaaatggtagtagctcaaagtgaagccgataatctgcgaaaagaaatcgaagcc
atgaatcgcagcagtatagagaaggaagagagagcgaaacaggtgcttaagggcgccaga
acgaagattatgcaattgacagagtctaagaagatctgcgagaaagaattattagatcta
aaatctaggatagaatctacgggaggcaacgctggagttcaaggagattctgatacggaa
catgacgcacgattagtggcactgaaatctcagatggaaggacgcatgtctagattggag
cacgagaaatcagagatacaggcagaaaaggaagcgcttttacagcgggttgctcaactc
caaagacagttatcgggagtaagcggggtaagcgcgactacggagccaccaacagcgaac
attaaaccgatgtctgccagagcggaaacaccactggccagcattagaccaatgagtgtg
gtggtgcagtcgcggacagctgcagtcttaccgactacagctggtgcaccggttatggtt
gcgccgcatcagatgcaacaacagcaggtagtacacactacagagacgagctcgccgact
agcagtctgaccgacttccaaccggcaagtaccagtacttcttcacaaagtgcacaaacc
agtggtcttcgtcaattagtggtgcaaccacagttaagtgaatcggcggagtcaacacag
agagaagacccagaaagtgcagagacacttaatttacagccgcaacagcaacaatgccag
cagcagcaacaacaacagcaacaaacagtagcgctagtgagtcccagagtagagcaacag
cagcagcagcagcagcagcagcagcagattaccgtcagtgatcagcaacagacagtggcg
agtagctccacacagtcggtcagtacttctcaagcttccacgggactcaagagacctcga
ggccgagattcaaccgcctctggttccgggatagttgaaggattggatcacggacgtcag
gagcaagtgcagagtccgaaaacaaagaggaccagaccggatatcagcgcaactgcgagt
gccagcgcttcggaagtggaatatcaggtgcctacatcaagtcagagggatcaagacgaa
gaagtagaagaaggatgcgtagtagtggtggactgtgatgaaggtgaaggtggaggcaat
catcaagcacaggaagaggaggaatttgacaatgatacgtatgaagagatagaggaagag
gaagaaatgccttatgaagtcgaagttgaagttgaacgagacaataatgaggtggaaatt
attatggaggaggattccaccagcgttgaaatctctagacaaggccaagccattattcct
gcaaatcaacaacaatccgaagccataagtagcgctggaccaaccgctgaacctgccacg
tccttcacagctgtgtcttctagaggaatcgcgcctatgcccagacagcagcaacagcaa
catcttcttttgccacaacaaggttacgaagatggcggtgacgattgtatcgtaccaagt
actcctactctctttgttcctcgtcgcgatggtttcggtgaagctgtgagttctccgcag
gtgccgcaagggcgtttcacttttggagactcttcggcacctacgacagcttcttcgaca
ccgtctttaacaacatccacaggctctaatactaggatttttggttcaactaattctgct
gttgtccaggaaagcctggatgatagtagaatggacctgacacaactggaggatggtgga
actggtcgtagtgttcccacgacaccacttcaggtttccccagctgcggatttacctcct
tcgactagtagcagccaatctgaagaacaagagagcaccgtaacacatgttaccgtaacg
gccacttctggagataatattgaagattctaacattcccagcattcatattgttggtgtt
gatgatcaacaacgaggttccactgaagctacagaatctagcgcaactccaagtgaagga
gtgagctcggagggtgaaaagcgggaagaagaaccagtagttttagcatctggagaggat
gatgctgtggatacggcagaagcgacggaagagacaggaagcgaacttgtcgaagaagaa
gtcgaggaggagaatcgggaagcggaagcatcgccgtctagtaacacacgacaaagaaca
atggcagcgaatctggcggcagcgagtgacgccaataatgccagaggaatgacagtgaga
agatcgccgagatcacctttcccgccgagggcaagaggtgcgaggcctacaccgattgtg
tggggcgaaactcagtcgggtagaggacagcctgtaatgcgaggacatgcggctagaggg
gccgccaatgaggggggacgaggacgagggacacgaggccgacgaatgcgttcgaaatat
ccttatgcccgatattcgtaa
DBGET
integrated database retrieval system
