Trachymyrmex septentrionalis: 108749109
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Entry
108749109 CDS
T11226
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsep01009
]
108749109
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108749109
04131 Membrane trafficking [BR:
tsep04131
]
108749109
03036 Chromosome and associated proteins [BR:
tsep03036
]
108749109
Enzymes [BR:
tsep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108749109
Protein phosphatases and associated proteins [BR:
tsep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108749109
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108749109
Membrane trafficking [BR:
tsep04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108749109
Chromosome and associated proteins [BR:
tsep03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108749109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108749109
NCBI-ProteinID:
XP_018343137
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MTESTVNLDLFTAAKQLADSEIELIKVIENSTKCQRTATNMLSNAKKTKKPGKSKNARPS
AALLAAKQEAAKRQLLSDKKSNNNFVPDIYQKAIDAYKMIRKETGLVFDQSMSEHKCIWD
PNYPECPARFTRVLQRCEELGLVQRCKFIEPRCATENELLSKHSQKQIDILKATDNSMDF
ENLELLSSKYDCVYIHPSTYRLSLLAVGSTINLVESICKGEIQNGMAIIRPPGHHAMKSE
YCGYCFFNNVALAVEKALNSGLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHG
EFWPNLRESDFHYIGEELGEGYNFNVPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLIIV
SAGYDAALGCPEFCPDLVLVSAGFDSALGDEKGEMLITPACYSHLLSSLLSLANGKVAVV
LEGGYCLKSLAEGAALTLRTLLGDPCPILQTLDLPSLSIRDTILNVIYSHKPYWKCYQYQ
DTHSINSVIHSKEEIANRHVVTMTFKGSEVKLEKYDTRNCYPVQSKETLEVVEKKLNELI
QLTNLYKALHKVCIVYDEKMQKHCNISDNSHPEKPNRISSIYKNHEEHGLLFLCTMKGRS
ATIEELSLIHAIDHIDDIKRTSTLKLKELQKQASDYNSVYLHSETWSSACISAGSLLQVV
DAVLNGECQSGVAIVRPPGHHAEKDIACGFCIFNNVAVAAMYAVQFYHVKRVLIVDWDVH
HGNGTQSIFEEDPKILYISVHRYDNGSFFPNSKLANYTSTGLNAGEGFNVNIPWNKKGMG
DAEYIAAFQQIVMPIAYQFNPELVLISAGFDACIGDTLGGCLVSPELYGHLTHWLSSLAN
GRIILSLEGGYNINSISHAMTMCTKALLGDPLPMLDPNLIPCTSAINSINNVLKTHKKFW
PNLQYGMSLPKERLLSKFKRIPNKREEQDVKNADKLKQIFMEPKIALEGIESEKLDLNLA
IDKNCLNLVTDEEISKLTCEVENIKIKNFELHTMKNEVVGAKRNPELKQSEAKNLDVSQS
IQKCVNETHQSRGSQQGNSDIREDCDDEGAASSQSETRPITLSEYLSDNLQALTAGEMFA
IVPLQDCPHLFTVNEVPPGGIDVTTPCVECASIAENWICLQCYTVHCARNINQHAMQHAE
EFEHPITLSFSDISVWCYGCEAYVDNPRLYAARNAAYQSKFNEELPWTYSESA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtccacagtgaacctggatctgtttactgctgctaaacaattagcagacagt
gagattgaactgataaaagtgattgagaattccaccaagtgccaaagaactgcaacaaat
atgctttcaaatgcaaagaaaacaaagaaacctgggaaatcgaaaaatgctcgtccatca
gctgcattattggctgccaagcaagaggcagcaaaacgacagctgctgtcagacaagaaa
tccaacaacaattttgtaccagacatatatcagaaagcaatcgatgcatacaaaatgata
cgcaaggagactggtcttgtattcgatcaaagcatgtctgagcacaagtgcatctgggat
ccaaattatcccgagtgtccagccagatttacacgagttttgcaaagatgtgaggagttg
ggcctggtgcagagatgtaaattcattgaaccaaggtgtgccacagagaacgagcttctg
agtaagcacagtcagaaacagattgatattttgaaggcaacagacaactctatggatttt
gagaatttggagttgttgtcgtccaagtacgattgtgtctatattcacccgtctacatat
agattatctttattagctgtgggctcaacaatcaatttagtagaaagtatctgtaaaggt
gagatacaaaatggcatggctattatcagaccacctggtcatcatgcaatgaaatcggaa
tactgcggttattgctttttcaacaatgtagctctggcagtagagaaagctctgaattcc
ggtttggcaaacaggattttaattgtggattgggacgttcatcatggacaagcaacgcaa
caaatgttttacaatgatccacgcgtagtttacttttcgatacatcgttatgaacatggc
gaattctggccgaacttaagggaatctgattttcattatattggagaggagctcggagag
ggttataactttaatgtacctttaaataaaaccggcatgactaatgctgattacatcgca
atcttccagcaagttttattgccaatggcttacgaatttcaaccggatttgataatagta
tcagcgggttacgatgcggctctgggttgtccagagttttgcccagacctggttcttgtt
tctgctggttttgattccgcgttgggcgatgaaaagggtgaaatgctgataactccagca
tgttattcacatttgctatcgtcgttgttaagtctggcaaatggaaaagttgctgtggtt
ttagagggtggttattgcctgaaatcattagcagaaggtgcagcattgactttaagaacg
ttattaggagatccatgtccgattttacaaacgcttgatttaccatcattaagtatacgt
gatactatcttaaatgtaatctactcacataaaccatactggaaatgttatcaatatcaa
gatacacacagcattaatagtgtaatacacagtaaagaggagattgctaatcgacatgta
gttacgatgacgtttaaaggcagtgaagttaaattagaaaagtatgacactcgaaattgc
tatcctgtacaaagcaaagaaacattagaggtcgtggaaaaaaaattgaatgaattgata
caattaacaaacttgtataaagcacttcataaagtatgtatcgtctatgatgaaaagatg
cagaagcattgcaacatttctgataattctcatccagaaaaaccgaaccgcatctccagc
atttataagaatcacgaggaacatggcttgttatttctttgtacaatgaagggaaggagt
gcaacaatagaagagttatccttgattcatgcaatagaccacatcgatgacatcaaaagg
acatcaactttaaaactcaaggaattgcaaaagcaagcctcagattacaattctgtttat
cttcattctgaaacatggtcgagtgcctgcatatctgctggctctcttttacaagtagta
gacgcggttttgaatggggagtgccaatccggagtagccattgtaagaccacctggacac
catgctgaaaaagacatcgcatgtggtttttgtatatttaataatgttgccgtagctgca
atgtatgctgtacaattttaccatgtaaagagggtgctgatagtagattgggatgtgcac
catggaaatggaacgcaatctattttcgaagaagatcctaaaatcctttacatctctgtt
catcgttacgataatggcagcttcttcccaaattccaagcttgctaattatacaagcact
ggcttaaacgcaggcgaaggattcaacgtgaacataccgtggaacaaaaaaggaatggga
gatgctgaatatatagcagctttccagcaaattgtaatgcctattgcttatcaatttaat
ccagaactagttctgatttcggccggatttgatgcctgcattggtgatacacttggaggt
tgtctcgtaagtccagaactctatggtcatttaacccattggctctcatccctggccaat
ggccgtataatcctaagtctcgaaggaggttacaacatcaactccatctctcacgcaatg
actatgtgtacaaaggcactcctgggcgatcctttaccgatgctggatcctaatctcatt
ccttgcactagcgcgatcaattccatcaataacgtactgaagactcacaagaagttctgg
cccaacctgcagtatggaatgtccttaccaaaagagagactactttccaaatttaagagg
attcctaataaacgtgaagagcaagatgtgaaaaatgcggataaattgaaacaaatattt
atggaaccaaagatcgccttagagggaattgagagcgaaaaattagacttgaacctggcg
attgataaaaactgtttgaatctagtgacagacgaggaaatttcgaagttaacgtgcgaa
gtggagaatattaaaataaaaaatttcgaattacacacgatgaaaaatgaagtagttgga
gcgaaaagaaatcctgaattgaagcagagcgaagcaaaaaatctggatgtgtcacaaagt
atacaaaaatgtgtgaatgaaacgcatcaatcaagaggcagccaacaaggaaattctgac
atacgcgaggactgcgatgatgaaggagcagcatcttcacaatccgaaacacgacccata
actctatcggaatatctctctgacaatctgcaggctctaacggcaggagaaatgttcgcg
atcgtgcctctgcaggactgtcctcatctgttcacagtcaacgaggttcccccaggtgga
attgacgtaactacaccgtgtgtcgaatgtgctagtatcgcagaaaattggatttgcttg
cagtgctatactgtgcactgcgcccgcaatattaatcagcacgcgatgcagcatgcagaa
gagttcgagcatcccatcacgctcagctttagtgatatttctgtctggtgctacggttgc
gaagcttatgtcgataatcctcgattatatgcggcaagaaacgcagcttatcaaagcaag
ttcaatgaagaacttccctggacttatagcgaaagtgcataa
DBGET
integrated database retrieval system
