Trachymyrmex septentrionalis: 108749119
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Entry
108749119 CDS
T11226
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108749119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108749119
Spliceosome [BR:
tsep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108749119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
108749119
NCBI-ProteinID:
XP_018343146
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSLADELLADLEENDDADAIMEEPEPQFIPTSVSKILEEEIKVSSVRELAQLRDSEQLQQ
VITQIEKHSKIPRKSTDIIGPVESDPEYQLIVEANNMAVKIDNEIAVIHRFTRDKYSKRF
PELESLVVGPLEYVMTVRELGNDLDRAKNNEILQQFLTQATIMVVSVTASTTQGQLLTEE
EREAICEACDMAVELNNCKSKIFEYVESRMAFIAPNLSIIVGASTAAKIMGVAGGLTKLS
KMPACNLLVLGSQKTTLSGFSQVATLPHTGFIYYSEIVQETPPDLRRKAARLVASKSMLV
ARVDACHESTDGHIGQMLREEIEKKLDKLQEPPPVKFVKPLPKPIDPGRKKRGGKRVRKM
KERYAITEFRKHANRMNFADIESDAYQEDLGYSRGTIGKAGTGRIRLPQIDEKTKVRISK
TLQKNLQKQQQWGGSTTVKKQVSGTASSVAFTPLQGLEIVNPQAAEKKVNEANAKYFSNT
AGFLKVKKTVEIWMDNNRLLNKKCTCDLANDYESAMECIHHLSLR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagctgacgaacttcttgccgatcttgaagaaaatgacgacgcggacgctatt
atggaagagccagagccgcagtttattccgacttcggtttctaagatcttggaagaagag
ataaaggtatcctctgttcgagaattggctcagttacgagattcagaacagttacagcaa
gttataacacagattgaaaagcacagcaagatacctaggaagtcgacggatattatagga
cctgtggagtctgatccagaatatcagttaatagttgaagctaataatatggcagtaaaa
attgacaatgaaatagctgttatacatagatttacaagagacaaatactcgaaaagattt
ccagaattggaatccttagttgtaggaccattagaatatgtaatgactgtaagggagttg
ggaaatgatctagacagagccaaaaataatgaaattttgcaacagtttcttactcaagct
acaattatggttgtttctgtgacagcatcgactactcaaggtcagttgttgacagaagag
gagagagaagctatttgtgaagcttgcgatatggcggtggaattaaataattgtaaatca
aaaatatttgaatacgtggagagcagaatggcgtttattgcgccaaatttatcgataatc
gtcggtgcatcgacagctgccaagattatgggtgtcgcaggcggtctgacaaagctttct
aaaatgccagcctgtaaccttttagtccttggatcccagaagaccacactctctggattt
tcgcaagttgctaccttgcctcatacaggctttatatattactctgaaattgtacaagaa
actcccccagatttacggagaaaagcagcaagactagtggcatcaaagagcatgttagtt
gctagagtagacgcttgtcacgagagcacagatggtcacattggacagatgctgcgcgaa
gagatcgagaagaaactagataagctgcaagaaccgccgcctgtgaagtttgtgaagcca
ctaccaaaaccaatcgatcctggtcgaaagaagcgcggcggtaaacgcgttcgcaagatg
aaggaacgttacgcgattacggaatttaggaagcatgccaacaggatgaattttgcagat
attgaaagtgatgcctaccaagaagatcttggctattcgcgagggacgattggcaaggct
ggcactggtcgaatcagactgccgcagattgacgagaaaacaaaagtcagaatatccaag
acactccagaaaaatctgcagaagcagcagcaatggggaggtagcaccaccgtcaagaaa
caagtctctggaactgcttccagtgtagcttttactcctttacaaggtcttgaaattgtc
aatccacaagctgcagagaaaaaagtgaacgaggcgaatgcaaaatacttttccaataca
gctggtttcctaaaagtcaagaaaacagttgaaatatggatggataataatcgactacta
aataaaaaatgtacctgtgatcttgcaaacgactatgagtctgcaatggaatgtatacac
catttatcactgcgatga
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