Trachymyrmex septentrionalis: 108749261
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Entry
108749261 CDS
T11226
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04136
Autophagy - other
tsep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108749261
04136 Autophagy - other
108749261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsep04131
]
108749261
03029 Mitochondrial biogenesis [BR:
tsep03029
]
108749261
Membrane trafficking [BR:
tsep04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
108749261
Mitochondrial biogenesis [BR:
tsep03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108749261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
108749261
NCBI-ProteinID:
XP_018343339
LinkDB
All DBs
Position
Unknown
AA seq
2116 aa
AA seq
DB search
MSKMSWLGWSADIKKRACRYLLQRYLGQFLEELTLDQLTVDLYNGTGRVVNVSLDVQALN
EMGEQQHLPLEFVDGFIMEISLSIPWSALLSQASYVEVKGLRLTVQPRQRIETGTSMFES
MWSSMTSSMQLAQECLQQDAANAGNAQPLEAVELFAQTIDSILSRVKVRFIDTVIRLEHV
PLNSSMGVAIEVWIQNLEYSDEAGLDPSNTSLDPNESAKSYIISAFSTKRFYMEGVTFHT
DEFPSHARTFSKSMLASTCSTPDSKNSDSLFTSAQMSPTQSILHTPPDGNAVNNSNESNP
IMFAKLAGRQEVRLKMKQGEGISGPKVELEITLGSLTLFLSPRQLHALLELAHGLASPDL
EDVSNVVPRRYTEKPMASSDFNRIERELIHQTHSMQDLKTTDLRYAQGWSTGSVDESDNE
DEFLPMKLAGSSSMCDSITSNNLSMEGSISISSISSKSSATNLPRHNRHRHNIDNDTSAE
TTQFHIRVSSVALVLLHEDILTPCVEQLGLTSSSVRQMRNAAKEFFRQLGTFAMGGYGSK
DFDTASKLLTEACRLSHIRLLAAPLVVEGSEKTTNQFSAISGSLTLACLEIVECLVDSNN
PSSYRTPSMEFVELLAFTKANTANIGFSNKTDFRMRFKYTQKAVRHTHMTKFAHPRTEFD
IQLEPCRGEVDITIVDRISAILNPQPICTYNTVVNARDANQQTLFDQAVDSTTLPDSRID
VKISSSSCTIKLRYIKLKYIVIHMYALSLFLFRFPVPDLRPLHDMSRAPWWKRSVRSDYM
MVQMTDAQVHSTVDSRSHYLAKHELQCRRLSLLYIETEGDTPIEIGLATADEKNDTAASG
QQVNDDLGWARVVVIMYPERLGAPLEDSSEEEIENDKRILDDTLEKTPKHAPSPFTSRRI
MRESDTLHSKSHSQNNERGQKYEQSDGEELIIPGNRQEMLEFIDEGIHGSRLQLEINLPC
ASVQIPSKRIYEQLYNRFNTDLFLWEPSAPRPKYTTHMESHIGLDLASTLLQESTYPKFS
MCKSGIQYNSDSDSDEEGIFHSATNEKNHKEARMSSKKAQSKLAITLSINQGLLSMYTPV
RDSMRNVIPGQQGELIIRLEDATIFSVSAYKGNANLSYACTMMRNISLDHCGLTTSPSQT
PPLRCINSVRPRYCERTIYRSTSGSNIAANPNDKDMVTVAVRIQAAHQTHRIKTFRVAIG
ISNATLRHRMCSAATSWFTELMDCLDVADHPVAGYTPPGVLTELHLHLWDCAIDYRPLHL
PLKSVVTLGNFSVSSNITAQTNTSTLRFIAEDVALFISDKLREKLVDLKRDYVCVMNFGL
FELSLRLNERMYGGVPRVDLRASNNVLHVRTCSDSGRALMQLLTYIANDGDLQQPNSTIN
SSTESIPTVPPASTKYEENLLGVESINTLSRSQVERVYSLMEDALEETVKGTTTQSSNES
EKIPMTENRVEFFFPDDSCATTREAETLKSSQECNKTIACSMEDDDDDDEFCILGEEAGT
GIIPRYGVPEVRSLCQEPLRIVDNHFSVPIGKTDLLQTPPNYPVPVLKYTLCEMTLIWHM
YGGNDFDSSQPQSAKHVIINDNIRNNIMHGRSRSAIGAVGFNKSSPNEVHFGSVPNSPRA
TRSNESLIDWHTLGGPGRRHDVLMELQLSKVRFQHEVYPENTREASRQVLLVHEIEVRDR
LASSHINKFLYQYSSEAKPRQSHSIMFTMKAVHVRPDPRLSAQECCLKLSLLPLRLNIDQ
DSLLFLIQFFNELGGGSKRNQESSSTPNSSQSTPVSKQGTPTHHPPIMSVNDDAVMNDAM
MNMSQNNIIDQNLLILLEDELTFREKKIKTKTIHQVHDDSQPIYFRNIVFGPEVLIRLDY
HGKRMDFTHGPLAGLLMGLAELNCSELRLKRLSYRHGLLGYDKLFTYLVSEWLQDIKKNQ
LPSLLGGVGPMYSVVQLFQGIRDLFWLPIEQYQRDGRIVRGLQRGANSFTTCTAMAALEL
TCRIVQALQTTAETAYDIVSPGPSVRCKNKGQKGRRKRYSQPLDIREGVANAYTLVKEGL
GETATQLVRVASEEHEHKGTVGAVGGVLRQIPPTVVKPIILATEATSNVLGGMRSSLVPD
ARREAVQKWRQDSDTC
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatgtcttggctcggttggtcggcggacatcaagaagagggcctgcagatac
ttgctgcagcgttatctcggccaattcctcgaggagctcacgttggatcaattgaccgtc
gatttatacaatggcacaggacgtgttgtcaacgtcagcctcgatgtgcaagcactcaat
gagatgggggagcaacaacatctcccactggaattcgtcgacggttttataatggagata
tctcttagtataccatggtcagcattacttagtcaagcaagttatgtagaagtcaagggt
ctcagacttacggtacaaccgcgacaaagaatcgaaacgggaacatcgatgttcgaatct
atgtggagttccatgacgtccagtatgcaactcgctcaggagtgtttgcaacaagacgcg
gccaatgcaggaaatgctcaacccttagaggcagtggaactgtttgcacagactatagat
tcaattttatctagggtcaaagtgagatttattgatactgtgatacgtttggaacacgta
cctttgaattcttccatgggagtagcgatcgaagtatggatacaaaatcttgaatattct
gatgaggctggattagatcctagtaatacatctctggatcccaacgaatctgcgaaaagt
tacatcatttcagcgttttccactaagcgtttttacatggagggagtaacttttcatact
gatgaatttccctcgcacgcgagaacgttctctaaaagtatgttggctagtacgtgctct
actcccgattctaagaactcggacagtctatttacctccgcacaaatgtctcctacgcag
agcattctgcacactcctccagatggaaatgctgttaacaactcaaatgaatcaaatcct
atcatgtttgctaagctagcaggtagacaagaagtgagattaaaaatgaaacaaggagaa
ggaatatcgggaccaaaggtagaactggaaattactctaggatcgcttactttgttcctg
agtcctaggcagcttcatgctttattagaattagcgcatggcctagcatctccagatcta
gaagatgtcagtaatgttgttccaagaagatacacggaaaaacctatggctagcagtgat
ttcaatcgtatagaacgtgagcttattcatcaaacacattctatgcaagatttgaagacc
acagatctacgatacgctcaaggatggtctactggatctgtagacgaatctgacaacgag
gacgaattcctaccaatgaaattggcgggatcttcttcaatgtgtgattcgatcacaagc
aataatttaagtatggagggcagcatatcaatcagcagcattagttcaaaaagttcggca
acgaatctgccaagacataatagacacagacataacatagacaacgacacgtccgccgag
actactcaatttcacataagggtgtcttccgtcgctctagttctattgcatgaagatata
ctgacgccatgcgtggaacaactcggtctaacttctagcagtgtaagacagatgagaaat
gcggcgaaggaatttttcaggcaattaggaacgtttgcaatgggcggctatggaagtaaa
gattttgatacagcatcaaaattactcacagaggcttgtcgacttagtcatattagatta
ctagctgcaccattagtagtcgagggcagtgaaaagactactaatcagttttccgcaata
tcaggaagtttgactttagcttgtttggaaattgtagaatgtttggttgactctaacaac
cctagctcgtatagaacaccatcgatggagtttgttgagctattagcatttacaaaagcg
aatacagctaatatcggattttccaacaaaactgattttagaatgagatttaaatatacg
caaaaggctgttcgacatactcacatgacgaaatttgcacatccacgcacagagttcgac
attcaactggaaccctgcagaggcgaagtagacattactattgtagataggatatctgct
attcttaatccgcagccaatatgtacttataatactgtagtaaatgctagagatgctaat
caacagacattatttgatcaagctgtagacagtacaacactgccagattctagaatagat
gtcaaaatctcttcgtcatcgtgtacaatcaaattgaggtacatcaaactaaagtatata
gtaattcatatgtatgcattatctctttttttatttagattccccgtaccagatttaaga
ccactgcacgatatgagtcgtgcgccatggtggaagagatctgtgagatctgattatatg
atggtgcaaatgacagatgcacaagttcactccactgtggacagccgatctcattatcta
gctaagcatgaattgcaatgtcggcgactatcgttattgtacatagaaaccgagggtgac
acgccaatcgaaattggtctagctacagccgacgagaaaaacgataccgccgcgtcgggt
cagcaagtcaatgacgatcttggttgggcgagagtggtggttattatgtatccagaacgt
cttggtgctccattagaggatagttctgaagaagaaatagagaatgataaacggatttta
gacgataccttggagaaaactccaaaacatgcgccttctccgttcacctctagacgaatt
atgcgtgaatccgacacacttcattcaaaatctcatagtcagaacaacgaacgtggtcaa
aagtacgaacaaagtgacggtgaggaactaattatacctggcaatcgacaagaaatgttg
gaatttatcgacgaaggcatacatggttctagattacaattggaaatcaatttaccttgt
gcttccgtccagataccgtctaaacgcatttacgaacaactgtacaatcgattcaacact
gatttgttcttatgggaaccgtctgcgcccaggcccaagtataccactcatatggaaagt
cacattggcctcgacctggcatctactctcttacaagagtctacttatcccaaattcagc
atgtgcaaaagcgggatccagtataattccgactctgattcggatgaggaaggtatattt
cattctgcaacgaacgagaagaatcacaaagaagcacgaatgtcttctaagaaagcacag
agcaagttggcaataactctaagcatcaatcagggtctcctgtctatgtatactcccgtg
cgtgattctatgcgtaacgttatacctgggcaacaaggagaattgatcatacgactagag
gatgccacgatattttcagtgtcagcgtataaggggaatgctaatctgagttacgcttgc
actatgatgaggaatatatcactggatcactgtggtttgacgacaagcccatcgcagaca
ccgccgttgaggtgtatcaatagcgttagaccacgatattgcgagagaacgatataccgc
agcacatccggtagtaatatagcagcgaatcctaacgacaaggatatggtgacagttgca
gtgagaatacaagcggctcatcagacgcaccgtataaagactttccgagttgcgataggt
ataagcaatgctacattgaggcaccgaatgtgttccgccgctacttcgtggttcacggaa
ttgatggattgcttggatgtggcagatcatcctgtcgccggctatacaccgcctggcgtt
ctgactgagctgcatttgcatctgtgggactgcgcgatcgattataggccacttcaccta
cctctaaagtccgttgtgaccttgggtaatttcagcgtgtcaagcaacattacagcgcag
actaatacgtcaacgttgcgttttatcgcagaggatgtcgcgctctttatatcagacaag
ctgcgtgaaaaattggtggacctaaaacgggattatgtgtgtgtaatgaatttcggcctg
ttcgaattgtcattacgtttgaacgagaggatgtatggtggcgtgccacgggttgatctt
cgggcaagcaacaacgtgttgcatgtacgcacgtgctcggactccggtcgcgctctcatg
cagttactgacttatatcgccaatgacggtgatttgcaacagccgaatagcacgatcaac
agcagtactgaaagtatccccaccgtgccaccggcatctacgaaatatgaggaaaatctt
cttggcgtcgagagtattaacactctcagtaggagtcaggtagagcgagtctacagtcta
atggaggatgcgttggaagaaactgtaaaagggacgacaacccagagtagtaacgaaagc
gagaagataccaatgaccgaaaatcgagttgaattcttctttcctgatgattcatgtgct
actacgcgagaggcagagacactaaaaagttcgcaagaatgcaataaaacaattgcatgc
agtatggaagacgatgatgacgatgatgaattttgtatcttaggagaggaggctggtaca
ggaataataccacgctatggagtacctgaggttcgatcgttatgccaagaaccattgagg
atagtggataatcacttttccgtgccgatcggcaaaaccgatttattgcagactccacct
aattatcctgtcccagtattgaaatatactctttgcgaaatgacgttgatatggcacatg
tatggtggtaatgatttcgatagttctcaaccacaatctgcaaagcatgtgatcatcaat
gataacattcgcaacaatattatgcatggaagaagtagatcagctataggtgcagtaggc
ttcaataagtctagcccgaacgaagtacattttggtagcgtgccaaactcgccgcgtgca
acgagaagcaacgaatcattgatcgattggcatacactaggtggcccgggtcggcggcac
gacgtgctgatggaactgcaattgagcaaggtccgtttccagcacgaggtctatccggag
aatacccgggaagcgtccaggcaggtgctactggtgcacgagattgaagtaagggataga
ctggcgtcatcgcacataaacaaatttctttatcaatatagcagcgaagcgaaaccaagg
cagtctcactctattatgtttaccatgaaagcagttcacgtaaggccggatcccagatta
agtgcccaagaatgttgtttgaaacttagtctactgccactgcgactgaacatagaccaa
gatagcctactgttcttaatacaattttttaacgaattaggcggtggatcgaagcgaaat
caagaaagctctagcacacctaatagctcgcaatccacccccgtatcgaaacaaggaaca
cctacgcatcatccgcccattatgagcgtgaatgatgatgcggtgatgaatgacgcaatg
atgaatatgtcgcagaataatatcattgatcagaatctgttgatactcttggaagacgaa
ctgacattcagggagaaaaagattaaaacaaagactatccaccaggtccacgatgatagt
caaccgatatactttagaaatattgtattcggtccagaagttctcattagattggattat
cacgggaaacgtatggattttactcatggaccgttggcgggtctattgatgggtttggca
gaactgaactgttctgaattaagactgaagagattatcatataggcacggattgttgggt
tacgacaaactttttacatatctagtttcggaatggttgcaagatatcaagaagaatcaa
ctcccgagtttacttggtggtgtgggcccaatgtattctgtagtacagctgtttcaagga
atacgcgatctattttggttaccaatcgaacagtatcagagagacgggagaattgtccgc
gggttacaacgcggagcaaatagttttacaacatgtaccgcaatggctgcattggaattg
acatgtagaatcgtacaggcgttacagactacagctgagactgcatatgatatagttagt
cctggtcccagtgttagatgtaagaacaaagggcagaagggtcgtcgaaagagatatagt
cagccactggatattcgagagggggtggctaacgcttacacattagttaaagagggttta
ggcgagactgcgactcaactggttcgcgtggcgagtgaggaacacgagcacaagggcact
gtcggtgctgttggcggtgtattgcgacaaattccaccgacggttgtgaaaccgattatt
ctggccaccgaggcgacgagcaacgtattgggtggcatgcgatcatcgttagtacccgat
gcacgtcgagaggcggtacaaaagtggcgacaagattccgatacgtgttaa
DBGET
integrated database retrieval system
