Trachymyrmex septentrionalis: 108749314
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Entry
108749314 CDS
T11226
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108749314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108749314
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108749314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
108749314
NCBI-ProteinID:
XP_018343417
UniProt:
A0A195FDX3
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSGKRTATTELNHDNWNEENEPEDAGVFALASNDILEKRVIKTARRRLPSKDGIPTKSAF
GSFAGFKTNPSLSPFGFLANTSTTSSTTTSTASATTVNTSNKQTASNGAPKIPEIDTDKR
EDFAHYKLQTSSTSTSKKNSVEQGTEKTRSHSSDYYAKLKGLNESVATWIKSHVDANPFC
ILTPIFKDYERYLKEITSKEESSKTQISHTSSEHITQAAKNDIKEISSEKKPEKSLFGNS
NANAKSTLITGTELKPEKSIFSNITTNTKSVFSNTEQKTENSKSVFGSTDVTPDKNKSIF
GSTESNVASKSVFGNTNVESSSFANKSTISDSGNKDEEETSSNAKSVAPTFPTFSFGQSS
TTSNVSAGFSFGSAKPFSFAPQTVKPQEKTEDKASNENKDEEDEEPPKQEFKLVTEEGAT
YEQRCKVFVKKDSVYTDRGIGMLYLKPTPNGKTQLIVRANTALGNLLLNTLLTQSIPTKR
MNKNTIMLVCLPMPDSSPPPVSVLLRVKTSENADELLEALNKHKK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaagcgaactgcaacaacagaattgaatcacgacaactggaatgaggagaac
gaaccggaggatgcaggagtgtttgcgctggcttcaaatgatatacttgagaagagagtt
ataaaaacagcaaggcgtcgtttaccatcaaaggatggaattccaacgaaaagtgcattt
gggtcgtttgcaggtttcaaaactaatccaagtttatctccattcggttttttagctaat
acaagtactacttctagtacgactacttctactgcatcagcaacgactgtaaatacaagt
aacaagcagactgctagcaacggtgctcctaagattcccgaaattgatacagataaaaga
gaggattttgcccattacaaattacaaacatcaagtacaagtacgagcaaaaaaaattca
gttgaacaaggaactgaaaagacaaggagtcactcgtcggattattacgcaaaattgaaa
ggactgaatgaaagcgttgctacatggataaagagccatgtagatgcaaatccattttgt
atattaacacctatatttaaggattatgagagatatttgaaagaaattacatcaaaagaa
gaaagtagcaagacacaaatttcgcatacctcttcggagcatataacgcaggctgcaaag
aatgatattaaagagataagttcagaaaagaaaccagaaaagtcactgtttggaaattca
aacgcgaatgcaaagtctactttaatcacaggaacagaattaaaacctgagaagtcaata
ttttccaacatcaccacgaataccaaatctgtatttagtaatacagaacagaaaacagaa
aattccaaatctgtgtttggtagtacagatgtaactcctgataagaataagtctattttt
ggaagcacagagtcaaacgttgcgagtaaaagtgtatttggcaatacaaatgtggaaagt
agttccttcgcaaacaaatctaccatttcagatagtggaaataaagatgaggaggagaca
tcctctaacgcgaagtctgtggctcctacctttcccacttttagttttggacagagttct
actaccagtaacgtgtctgctggatttagtttcggaagtgcaaagccattttcatttgct
cctcaaacagtaaaaccacaagagaaaaccgaagacaaagcaagcaatgaaaataaagat
gaagaagatgaagaaccaccgaaacaagaattcaaactggtaactgaagaaggtgctact
tatgaacaaaggtgtaaagtcttcgtaaagaaagatagcgtttatactgatagaggcatc
gggatgttgtatttgaaaccaacaccgaatggaaagacgcaattgatagtacgagccaat
actgctttgggtaatttgttactcaatactctattgactcaaagcattcccacgaagcgc
atgaacaaaaacacgataatgttggtctgcttaccgatgccagattcttcaccgccacca
gtctcagtgctattaagagtgaaaactagtgaaaacgcggatgaattactggaagcgtta
aataaacataaaaagtag
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