Trachymyrmex septentrionalis: 108749326
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Entry
108749326 CDS
T11226
Name
(RefSeq) homeobox protein SIX3 isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsep03000
]
108749326
Transcription factors [BR:
tsep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108749326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
108749326
NCBI-ProteinID:
XP_018343437
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSAAGTTPPNANGPLVPCPYLALPTLSFSVSQVATVCETLEESGDIERLARFLWSLPVAH
PNIQELNQSEAVLRARAIVAFHSGHYRELYAILERHKFTKDSHGKLQAMWLEAHYQEAEK
LRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPGKKREL
AAATGLTPTQVGNWFKNRRQRDRAAAAKNSRMQQQSGQGNGNARRTLSPGPGGSSSEESD
ISLGGTSPPSPSSSPPPNHQPSPVPLGSLGPLPPPSLNFRFDPTQTHFRFGHTTAFKFPP
TSFRFGPHSPQPNPHPNMPGGGIFRFTESSPFQAVGPRGDPATRENAVLSLLYYRLPDSL
GLPPPRLHPHEGLLHHPHPQHQLSEGISRISETSRLSDGGLSRLSDSLSEAHSPPLMAAN
LSVTGPLRVAVPSPHTPSSRGSPPPRQPTPQGQSQGQGLIRVATPPPANPRPQIHRPFSP
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgctgggaccacgccgccaaacgcgaacggtccgctcgtaccttgtccctat
cttgctttgccaactctatctttctccgtcagtcaagtggcaacggtttgcgagacctta
gaagaaagcggcgacatcgagaggctggccaggttcctatggagcctaccagtcgctcat
cccaatattcaggaactgaaccagagcgaggctgttctcagggcacgagccattgtggcg
tttcactcgggacattatcgggagctttacgctatactcgagaggcacaagttcaccaag
gattctcacggtaaattgcaagccatgtggctagaggcacattatcaggaggccgaaaaa
ctccgcggccggccgctgggacccgtagacaagtatcgcgtaaggaagaaattcccattg
ccgagaacaatctgggacggcgagcagaagacgcattgcttcaaagaaagaaccagatcg
ctgctccgagaatggtacctccaggatccttatccgaatccgggaaagaagagggagctg
gccgccgcgacgggactcacgccgacgcaagttggaaattggttcaagaacaggaggcag
agggatcgcgctgctgcagcgaaaaacagcagaatgcagcaacagtcgggtcaaggaaac
ggaaacgcgcggcgtactctgagtccgggacccggcggcagcagcagcgaagagtccgac
atttccctcggaggaacatcaccgccatcgccaagttcctcgccgccaccgaaccaccaa
ccgtccccggtaccgcttggatctctcggacctttgccaccaccctctttgaacttccgt
ttcgatcccacgcagacgcattttcgattcggtcatacgacggctttcaagttcccaccg
acgagcttccgatttggaccgcacagcccgcagcctaacccgcatccgaatatgccgggt
ggtgggattttcaggttcacggagtcgagtcctttccaagctgtaggacccagaggtgat
ccggcgacgagagaaaatgcagttctttctttactctattacagactgccggattcgctg
ggtttgccgccgccaagattgcatccgcacgaaggcctgctacaccacccgcacccccag
catcagctgtccgagggaatatctaggatatccgaaacgtcgcgactatcggacggtggg
ttgtctcgtctttcggacagcttatcggaggcccacagcccaccattgatggcggcgaac
ctatcagtcaccggtccgctaagggtggctgtacctagcccgcataccccctcgtctcga
ggaagcccacctccccgtcaaccaacacctcagggtcagtcccaaggtcagggattgata
agggtcgcaacgccaccacccgcgaatccgagaccgcagatccataggcccttttcgcct
gcgtga
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