Trachymyrmex septentrionalis: 108749785
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Entry
108749785 CDS
T11226
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tsep03029
]
108749785
Enzymes [BR:
tsep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108749785
Mitochondrial biogenesis [BR:
tsep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
108749785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
TPR_24
PPR_3
DUF2274
EspB_PPE
Motif
Other DBs
NCBI-GeneID:
108749785
NCBI-ProteinID:
XP_018344251
UniProt:
A0A151JW97
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MLNFLRIRVVSMQKARITSTRPVTQSRARLCSFCNFHHLSPPRAARCTVIRCYATTDTVK
LHVSLQKKIKRRVKKYAELLEVTNQSTNNRKAAVSRLSSTQMSILVDQPNITLDKLHKIP
NFHVKKEKITTQKKDTNEKIGFKKDLVHMDDKTDDIHYAISKEFEGQLDDTSAVVENLKE
SGVSDQTTLIKDSSFLNILQGDKNEENNQDDILVQIPKCESSTSYAKIPFTNEPGLLENH
LFDHNLISQILAHIDVYIQINMSHKAFKLLTSNKNHLKKCKVSPAPLYNLLLKTHISNAH
VEKAFEIYRTLKEDSIQPNCETYALMFEIIGRIKNQVKRAENAAKVMADMNHNGISFDQI
INTSLNTTQRNAILHCMKLLDLNYCAQPQATDTSYNCNLLRDLTTNNNWQSPAKGVVTMD
ELRDMMNMQVDIEKQCTMDVKTVALFTGDPEVKQQAIKRIAEWEKTWKSTVAEAFERNLT
YLKQKETKMKNDLKSLYPFLQVLPKEEYINAIMKEISQLTKFSEGFSYTMTYLYLTLGQY
IYKRYEFQRKMKDGVIDNSIQIYKKYLEWYMKKNPADRISNGRIKWQQLINDAQKSGVCY
ELSVPEWSHNTMMNVGKFLYNIIVNDVKISHVSKPGAPERQIPAFYLLFRLHSNKFFMEE
IKPHPQLHRFYKDLHSETLSFETILLPTFCPPRPWVNVNTGGYLFSKAAFVRDFYMKSSH
LLRNTPTKQLYPAFDSLNQLGSIPWRINVPMLDILIQIFRDGGSKELNVPQPSTVIPSST
DIISSETNKNPKQIMKLLFQFKRKKNEMHSLWCDCLYKLSLANHFRDKVFWMPHNLDFRG
RAYPVSPNLTHLSSDLGRSILMFAQGKPLGSSGLDWLKIHAINMSGLKKREPMHKRLEFA
NEILDLIVDSARNPLTGKMWWTKADEPWQTLATCKEIDNALQSPNVKEYICRLPIHQDGS
CNGLQHYAALGRDLIGAKSVNLYPSDRPQDVYSVVASMVDEYRKIDADAGNRIAQALEGH
VSRKVMKQTVMTTVYGVTKFGARLQIARQLSDLEDFDQQYVWNGSMYLTQKTFMSLQSMF
ESAKEIQNWFTDCARAITIRCNQYVQWVTPLGFTVMQPYFKHKSSNLKFKIKKLDTVKQK
NAFAPNFVHSLDSSHMMLTSLYCEQAGITFMSVHDCFWTHPSTVDIMNRICREQFIALHS
EPILENLSEFFCKNYGKHIANNKGDVKLTGDKVSLEIFQKIPKKGTFDINSVMSSRYFFN
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgctcaactttctgaggatccgtgtcgtctcgatgcagaaagcacgtatcacgtcaacc
cgaccggtgacccagagccgggcgcgactatgttcgttctgcaacttccatcatctgagc
ccaccccgtgcagcgagatgtacagtgattcgatgttatgcaacaaccgatacagtgaaa
ctacacgtttccttgcaaaaaaaaatcaaacgtcgcgtgaagaaatatgcagaattattg
gaagtaacaaatcagagcaccaacaacaggaaagcagcagtgagtaggttgagttctacc
cagatgtccatcctggttgatcagcctaatattacactagacaaactgcacaagatccct
aattttcatgttaagaaggagaagattacgacacaaaagaaggacaccaatgaaaagatt
ggatttaaaaaggatttagttcatatggatgacaaaacggacgatatacattatgccata
tctaaagaatttgaggggcaattagatgatacatccgcagttgtggagaatctaaaagag
tctggcgtaagcgatcaaactacgttgattaaagattcttcttttctgaatatactgcag
ggtgacaaaaacgaagaaaataatcaagatgatatacttgtgcagattccaaaatgtgag
tcttcaacttcgtatgctaaaattccttttacaaatgagccaggtttgttggagaatcat
cttttcgatcacaatctaatttctcagatattggcgcatattgacgtttatatacaaatc
aacatgtcgcataaggccttcaaattgctcacgtccaataaaaatcatcttaagaaatgc
aaagtctcgcccgccccgctttacaatctgctcttaaaaacccatatttctaatgcgcat
gtggaaaaagcatttgaaatctacagaacattaaaggaggattctatccagccgaattgt
gagacgtatgctctcatgttcgagataatcggaaggataaaaaaccaggtgaaaagagca
gaaaacgcggctaaagtgatggcagatatgaaccacaatggcatctcttttgatcaaata
attaacacatcgttaaatacaacgcaacgcaacgccattcttcattgtatgaaattatta
gatcttaattattgtgcacagcctcaagccactgatacttcatacaactgcaatctactg
agggatctgacgacgaataataactggcagagcccggcaaaaggagtagtgaccatggac
gagttgcgggatatgatgaatatgcaggtcgacatagagaagcagtgtacaatggatgta
aagaccgtcgcgttgttcactggagatcccgaagttaaacagcaagctatcaaacggatc
gcggaatgggaaaaaacctggaaatcgactgtagccgaggctttcgagaggaatctgact
tatctgaaacagaaggagacaaagatgaagaacgatttaaagtccttgtatccatttctg
caagtattacccaaggaagagtatatcaacgcgataatgaaagaaatcagccagctgact
aaattctccgagggattcagttatactatgacgtatctttatctaacactgggacaatat
atttataagaggtacgagtttcagcgaaagatgaaggatggtgtcatagacaattctatt
cagatttacaagaagtatttggagtggtatatgaagaagaatcctgcggacaggatcagc
aacgggcgcatcaaatggcagcaactcatcaatgatgctcaaaagtctggtgtgtgctat
gagctatcggtgccagagtggtctcataacactatgatgaacgtaggcaaatttctgtac
aacatcatcgtgaacgacgtgaaaatctcacacgtatctaagcctggtgcgcccgagcga
cagatacccgcattctacctgctcttcaggctccactccaacaagtttttcatggaagag
atcaagcctcatcctcaattacacaggttttacaaggacttacattcagagacactctct
tttgagacaattttgttgccgacgttctgtccgcctcgtccttgggtcaacgtaaacacc
ggtggttatctgttctccaaggcggcgtttgttcgcgatttttacatgaaatcatcacac
ctactgagaaatacgccgacaaaacaactgtatccagcattcgacagtttgaatcaactc
ggttcgattccgtggagaattaacgtacctatgttggatatcttgattcagatcttcagg
gatggtggctcaaaagagctgaatgtacctcaaccatccacagtaattccatcttcgacg
gatatcatctcgagcgaaacaaataagaatcctaaacagataatgaagctgctgtttcaa
ttcaaacgtaagaaaaacgagatgcactcgctatggtgcgattgtctttataaattatct
ctcgcaaatcacttcagagacaaggtattctggatgccgcataatttggactttagaggt
agggcgtacccagtgtcgcctaatctgacccatctcagctcggacttaggccgctctatt
ctcatgttcgctcagggtaagcctttgggttctagtggtctggattggctgaagattcat
gcaataaacatgtccggtttgaagaagagagaaccgatgcacaaacggttagagttcgca
aatgagatattggacctgattgtggacagcgcgagaaatcctctgacgggaaagatgtgg
tggaccaaggccgatgaaccatggcaaacgttggcgacatgcaaagagatagataacgct
ctccaatccccaaatgtgaaggagtacatctgccggcttcctattcatcaagacggtagc
tgcaacggtttgcagcattacgctgcgctcgggagagatctaataggagcgaagagcgtg
aatttgtatccttcggacaggccacaggacgtgtacagtgtcgtcgctagtatggttgac
gagtacaggaagatcgacgcggatgctggtaatagaatagctcaggccttagaaggacac
gtcagtaggaaggtcatgaaacagactgtaatgactacagtgtatggcgtgacgaagttt
ggcgccaggctacaaatcgccaggcagctcagcgatttggaggattttgatcagcagtat
gtttggaacggcagcatgtatctgactcaaaagacattcatgtctcttcagagtatgttt
gagagcgcgaaggagatacagaactggttcacggattgcgcccgcgctatcacgatcaga
tgcaatcagtatgtgcaatgggtgacgccgttgggttttacggtcatgcaaccctatttc
aagcataagtcaagtaacttgaaattcaagatcaagaaactggacacagtaaagcaaaag
aatgccttcgcgccgaattttgtccactcgttggactcctcccacatgatgttaacgagc
ttgtattgtgaacaggcggggatcacatttatgtcagtgcatgattgtttctggacgcac
cctagcacggtggatattatgaacagaatttgccgggagcaattcatcgcgcttcacagt
gagcccattctcgaaaatttgtccgaattcttttgtaagaactatggaaagcacattgcg
aacaataagggggacgtgaagctaacaggcgacaaagtttcgctagagatcttccaaaaa
ataccgaaaaagggtaccttcgacatcaattcggtcatgtcgtctcgatatttctttaat
tga
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