KEGG   Trachymyrmex septentrionalis: 108749903
Entry
108749903         CDS       T11226                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tsep  Trachymyrmex septentrionalis
Pathway
tsep03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tsep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108749903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsep03021]
    108749903
   03036 Chromosome and associated proteins [BR:tsep03036]
    108749903
Transcription machinery [BR:tsep03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108749903
   Coactivators
    SAGA/TFTC/STAGA complex
     108749903
Chromosome and associated proteins [BR:tsep03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108749903
    STAGA complex
     108749903
    TFTC complex
     108749903
    SAGA complex
     108749903
    SLIK complex
     108749903
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 EIF3I TFIID_NTD2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_DCAF4 Tricorn_2nd RMC1_N WD40_like Beta-prop_DCAF12 eIF2A Cytochrom_D1 CTLH
Other DBs
NCBI-GeneID: 108749903
NCBI-ProteinID: XP_018344428
LinkDB
Position
Unknown
AA seq 588 aa
MKMKRMKSEVISATIESYLKRRHYQTHDYRKGDQLFCQNSDQTTLNATAECGTSQDNSIV
FSAITIDIAAADQAYQRLKKWMSVVFNEKLRIELQGLLYPIFCHLYLEMLHAGNRQAAIQ
FLKTHQNEFMSDTEKDFLEELSSVFSVQDIELRPLVNAFRTRKYKVDLSESAHICLRQYL
TKYGHIILMQIINTHITIIRKTGSLQMDGEVPEEKSQRYETSINGHVEQPSGTGVDREMR
ELQEAIRLIQHNSHQALRLFTVKNAIENASCGLIAPKMDKLAVGFSTAEIRLWAIGDTVL
VKKNDKQTCVPSTCDISPFYKFNEQESTVRSEAGAIILRGHTDVVHDLRFIPEVDILLSV
SSDKDMRAWKLNNYSCTAIYSGHSYPIWCMDTSVFNLYIGTGSHDRTAKLWSLDRTFPLR
IFAGHFLDVNCIKFHPNARYLATGSADKTVRLWSKDDGNLLRVYVGAQSTIYTLVFSPDG
KYLAAAGDDKSIYIWDLATNGLLTELKGHKDTIMNVDWSLDNQYIASASLDGIVRLWPTQ
DFIKTLNGGSSTTMLQSETPQIYSTYCSSILSLNYYKKSNSLICIGTK
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgaagatgaagcggatgaagagcgaggtgatcagcgcgacgatcgagtcttacttaaaa
cggcgtcattatcagacccacgattatcgcaagggcgatcagttgttctgtcagaacagc
gatcagacaacattgaacgcgaccgcggagtgcggcacttcgcaggacaactcgatcgtt
ttcagtgccatcaccattgacatcgctgcggcagatcaggcatatcagcgattgaagaaa
tggatgagcgtcgtattcaacgaaaaattacgaatagaattgcaaggacttttgtatccg
atattttgtcatctttatttagagatgttacatgctggtaatcgccaagctgcaatccaa
ttcttaaagacgcatcagaatgagtttatgagtgatacagagaaagactttttagaggaa
ttatctagtgtattttcggtgcaagacattgagctgaggcctttggtaaatgcgttcaga
actagaaagtataaagtagatctgtccgaatcggcacatatttgcctgagacaatatctt
accaaatatggacacataatattaatgcagattataaatacacacatcacaataattaga
aaaacaggcagccttcaaatggatggagaagtacctgaagagaaaagtcaaagatatgaa
acaagtattaatggtcacgtggaacaaccatctggtactggtgtggatcgtgaaatgagg
gaattacaggaagctatacgattgatacaacataattctcatcaagcattaagattattt
acagtgaaaaatgctatagaaaatgcaagttgcggtcttattgcacctaaaatggataag
ttagctgtaggttttagtacagctgaaatacgtttgtgggctataggcgatacagtcttg
gtcaagaaaaatgataagcaaacgtgtgttccgtctacctgtgatatatcaccattttat
aaattcaacgagcaagaaagcacagtaagaagcgaagcaggggccataatattaagagga
catacggatgtagtacacgatttaagatttattccagaggtagatattcttctttctgta
tcgagcgacaaagatatgagagcatggaaactcaataattattcatgtacagcaatatat
agcggtcatagctatcctatatggtgcatggataccagtgtgttcaatttatatatcggc
acaggctcacatgacagaactgcaaaattgtggtcattggatagaacatttcccttgaga
atatttgcaggtcattttttagatgtcaattgcataaaatttcatccaaacgcaagatac
ttagcgactggttccgctgataaaactgtaagattatggtcaaaagatgatgggaatcta
ttgcgagtatatgttggagcacaatcgactatttacactttagtttttagtccagatggt
aaatatctggctgctgcaggtgacgataagtccatatatatatgggatttagcaactaat
ggtttactgactgaactgaaaggtcataaagatacaatcatgaatgtagattggagttta
gataaccaatatatcgctagtgcaagcttagacggaatcgtacgattgtggcctactcaa
gatttcatcaaaacattgaatggaggatcgtcaactactatgttgcaatcagaaacacca
caaatttattcaacgtattgctcaagcattctctcactgaattattacaaaaaaagcaat
tcgttaatttgtatcggtactaagtaa

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