Trachymyrmex septentrionalis: 108749951
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Entry
108749951 CDS
T11226
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsep03016
]
108749951
Enzymes [BR:
tsep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
108749951
Transfer RNA biogenesis [BR:
tsep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108749951
Prokaryotic type
108749951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H
Motif
Other DBs
NCBI-GeneID:
108749951
NCBI-ProteinID:
XP_018344555
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MSNIDGHSAENSKNRYFHGSRRRGGYQHKPGRRSFKRTLDRSPRENVKRSKLDIGSRLKE
SDIGITEYIGKHLGFSAIIKERYNDFHVNEIDLNGQVAKLTHQDIPRNPSDDESIEDLKA
LVSLTIWDQLQALGKENPSSVEIDVTNIDKIERRTIHTIAKKLANVVSQTVDKGDKKFLT
IVPNTKNDINGPKIRKDKRIDWSRCGGDYCYFLLHKVNMDTISVVNQLAVSLRLQPNNFC
YAGTKDRRAWTTQWISLRKVEPHNILRAGKSIRGAYVGNFKYAKDSLKLGMLSGNQFRIA
LRNACETDEKIERAMKSLQDNGFINYYGLQRFGSVPTIPTHEIGKCLLQGKWHEAIELIL
KPRPETDNELAEVRRIYAESKDARAAYAKLKRIDTIEARLLKGLQISGDKNPLGVLDSIP
RNIRLMYIHAYQSFVWNHIVSKRIEQFGTKVVVGDLVYDKQNCKETINNESTDYPLNDNE
DIKDKTDITSVEEKDIESTSNEVNKENSEQDFPTVKILTEEDLSNYILTDVVMPQPGWKV
TYPPYAKAWYDEFLAKDGLTTDLRQNNKKYSLSGAYRNILEIPTNLSWKIMHYENKHDDL
ILSDIDEMRKHTSPQDKPNGKNKALIIEMCLKSSSYATMALREILKNDTSAETQAALSAA
HDVENIKSNVTTIDECSSKDLEIEKDYTEKNSDECHEDIDVKTDETMKINDIENISETCP
IIK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatatagacggacattctgccgagaatagcaagaatcgctacttccatggatca
agacgaagaggtggttaccagcacaagcctggcagacggagcttcaaacgcaccttagat
cgatcaccacgagaaaacgtgaagagaagcaaattggatattggcagtagattgaaagaa
tctgacataggaattacggaatatattggcaagcatcttggcttttctgcgataattaaa
gagaggtacaacgattttcatgtcaacgagatagatcttaatggacaagtggccaagctg
acccatcaagacatcccgcgtaatcccagtgacgacgaaagtatcgaagatctgaaagca
ttggtgtcattgacaatatgggatcagctgcaagctttgggaaaggaaaatccttcgagt
gtggaaattgatgtgactaacattgataaaattgaacgtaggactattcatacaattgct
aagaaattagcgaatgtcgtcagccagacagtagataagggcgataaaaagttcctcaca
attgtgccgaatactaaaaatgacataaatggtcccaagattcgcaaagataagagaata
gattggagcagatgtggaggagattattgttactttctgttgcacaaagtaaatatggat
acaataagcgttgtgaaccagttagctgtaagcttgcgattacagccaaataacttttgt
tacgccggcacgaaagaccgccgagcctggacgactcagtggattagtttgagaaaggta
gaaccgcataacatattgcgagctggtaaaagtatacgcggtgcgtatgtagggaacttt
aaatacgctaaagacagtctgaaattaggaatgctgagtggtaatcagtttagaatagcg
ctgagaaatgcctgtgaaacagacgaaaagatcgagcgagcgatgaagtcattgcaggac
aatggctttattaattattacggtttacaaagatttggatcagtacctactatacccaca
cacgaaattgggaaatgtctacttcagggtaaatggcatgaagcaattgaactaattctg
aaaccacgaccagaaacggataacgaattggcggaagttagacgaatctatgcggaaagc
aaggatgcccgtgctgcctatgccaagctcaaaagaatcgatacaattgaagccagactt
ttgaaaggtctacaaatatcgggtgacaaaaatcctctaggtgtactcgactcaatccct
cgaaacattcgattaatgtatattcatgcttatcaaagtttcgtatggaatcatattgtg
tcgaaaaggatagaacagttcggaacaaaagtggtcgtaggtgatttagtttatgacaaa
cagaattgcaaagagactataaataatgaaagtacggattatcctttgaatgataatgaa
gacattaaagataaaactgatattacctctgtcgaagaaaaagatatcgagtcaacatcg
aatgaagtaaataaagaaaattcggagcaggattttccaacagtaaaaattcttacagaa
gaagatttatcgaattacattttgactgatgtagttatgcctcagcctggatggaaagtt
acatatccgccgtatgcaaaagcctggtacgatgaatttttagctaaggatggattaact
accgatcttagacaaaataacaaaaaatacagtttaagtggtgcttatagaaatatatta
gaaattccaacgaatctatcttggaagattatgcactatgaaaataaacatgacgactta
atcttatcagatatcgacgaaatgaggaagcatacgtctccgcaggataaaccaaatgga
aagaacaaagcattgatcatagaaatgtgtttgaagtctagcagttatgccacaatggct
ttgcgtgaaatattgaagaatgatacttcagcagaaacgcaggccgctttatcagccgct
cacgatgtagaaaatataaagtccaacgtaaccaccatagatgaatgtagcagcaaagac
ttggaaattgagaaagattatacagaaaaaaattccgacgaatgccatgaagacattgat
gtaaagacggatgagacaatgaagataaacgatatagagaatatatcagagacatgtcca
attataaaataa
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