Trachymyrmex septentrionalis: 108750218
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Entry
108750218 CDS
T11226
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108750218
09123 Folding, sorting and degradation
03018 RNA degradation
108750218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108750218
03041 Spliceosome [BR:
tsep03041
]
108750218
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108750218
mRNA degradation factors
5'-3' decay
Lsm complex
108750218
Spliceosome [BR:
tsep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108750218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
108750218
NCBI-ProteinID:
XP_018345041
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
MSAPKQQQNVEHKEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNT
KEYLRDPDDPYKLNQDTRMLGLVVCRGTSVVLICPVDGMESIQNPFIQQEG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgccgaaacagcaacagaatgttgagcacaaagagaagaagaggaaagagagc
attcttgatttgtcgaagtatctcgagaagaatataagggtaaaatttgccggtggcaga
gaagctgaaggtatccttaaaggttatgatcctttactcaacttagtacttgacaacaca
aaggaatatcttagagatccagatgatccatacaaattaaatcaagacactcgtatgctg
ggtttggtagtgtgcagaggaacatctgtagtgcttatttgtcctgtagatggcatggaa
tctattcagaatccgttcatacaacaagaaggataa
DBGET
integrated database retrieval system
