Trachymyrmex septentrionalis: 108750241
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Entry
108750241 CDS
T11226
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108750241
03012 Translation factors [BR:
tsep03012
]
108750241
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108750241
Translation factors [BR:
tsep03012
]
Eukaryotic type
Initiation factors
eIF-3
108750241
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_Aladin
RRM_1
Beta-prop_ELP1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
DUF8729
DUF2153
Motif
Other DBs
NCBI-GeneID:
108750241
NCBI-ProteinID:
XP_018345079
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MAKKTQAEKTAQNDETVKGNDDPMNDDEEPNFSDPEGFVDDITDEELLGDILKQKPSETD
GVESVIVVDNVPRVEPDKLEKLQSVINKVLGKFGTIVNQYYPMNETDGKTKGYIFLEYNN
HLNALTAVKSTNNYKIDKSHTFKVNLFTDFKKFEDIPENWEPPKAQPFKAASDLHYHLLE
PDAYDQFCVLCGNGAGVSVQIWQNSAPEPTSLEERNRWTETYVKWSPLGTYLSTFHKLGV
ALWGGPQFTQQARFSQRGVECIDFSPCERYLVTYTPRTDLGQDQKRLVIWDILSGQEKRS
FFPDGSSVWPIFRWSHDDKYLARMGEDILSVYETPSFGLLDKKSIKIPGIRDFSWSPTDN
VLAYWVPEDKDVPARVTLLEIPNRNEIRNKNLFNVADCKIFWQKSGDYLCVKVDRFAKRK
EKTEQKYTGMSYNFEIFHMREKQIPVDSVEIKEPIHAFAWEPVGSKFAIIHGEIPSVNVS
FYEVRYGHQPALLKRLEKKACNHLFWSPSGQFIVLAGLTTMAGALEFIDTNDFTIMNSTD
HYQTSDVEWDPTGRYVVTAVSSWKTSVDNGYWIWTFQGRILKRVNLTAFNQLLWRPRPPT
LLTAEQIKEIKKNLKKYSAQFESKDRMRLTRASKELIEKRCLLMKAFEEYRTKRIDEWNN
QKKRRLELRCNIDTDELDSDSKNVEEEVVEFFVKEETFVIDDK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaacgcaggcagagaaaacagcacagaacgacgagaccgtcaagggcaac
gacgatccgatgaacgacgatgaggagcccaacttcagcgatccggaaggcttcgtcgac
gacatcactgatgaggaattgctcggtgatatattaaaacagaaaccttctgaaacggat
ggagtggaatccgtgattgttgtggataatgtgcctcgggtggagcctgacaaattggag
aagcttcaatctgttatcaataaagtcctgggaaagtttggcacaatagtcaatcagtac
tatccaatgaatgagaccgatggcaagactaaaggatacatttttctggaatacaataat
catttgaacgcgctcaccgcagtcaagtccaccaataattacaagatcgacaaatcacat
acattcaaagtcaatcttttcacggatttcaaaaagtttgaggatattcctgaaaattgg
gaaccgccgaaggctcagcctttcaaggctgctagcgacttacactatcatctgctagag
ccagacgcttatgaccagttttgtgttctttgcggtaatggagcaggtgtgtcagtgcaa
atttggcaaaactctgcgccagagcccacttcactcgaagaacgtaaccgctggacagag
acatatgtgaaatggtcaccactaggtacatatttgtccacgttccataaactgggagtt
gctctgtggggtggtcctcagttcacccagcaagctagattcagtcagcgaggtgtcgaa
tgtattgacttttcaccctgtgaacgttacctagtcacctatactccgcgcactgatctt
ggacaggatcaaaagcgcctagtgatttgggatatcttgtcaggccaggaaaaacgatca
ttcttccctgatggatcttccgtctggccaatcttccgttggtcgcatgatgataaatat
ctagcacgcatgggagaggacattctcagtgtctatgagactccatcgtttggtctgctg
gacaagaaaagcattaagattccgggaatcagagattttagttggtctccgacggataac
gttcttgcttactgggtgccagaagataaagatgttcctgcgagagtaactttgctcgaa
attcctaaccgcaatgaaataagaaataagaatttgttcaacgtggcagactgcaagatc
ttctggcaaaaatctggtgactacctgtgcgtgaaagtcgaccgctttgctaaacgtaag
gagaagacagagcaaaaatacacaggtatgtcgtataatttcgaaattttccacatgagg
gagaaacaaatacccgttgacagtgtggagataaaggagccgattcatgctttcgcatgg
gagccggttggtagcaaatttgccatcattcacggagagatacccagcgtaaatgttagt
ttttacgaagtgcgatacggccatcaacctgcgcttctcaaaagattggaaaagaaggct
tgcaatcacctattctggtcaccatcgggtcaattcatcgtccttgctggtctaacgacg
atggctggtgctttggaattcatcgatacgaatgatttcaccattatgaactctactgat
cactatcaaacctcagacgtagaatgggatccgactggcagatatgtcgtcacggcagtg
tctagctggaagaccagcgttgataatggttattggatatggacgttccaaggtcgtatt
ttgaaaagagtcaacctgaccgcgttcaaccaactactgtggcggccgcgacctccgact
ctactcactgcggagcagattaaggagataaagaagaacttaaagaaatactcggcgcag
tttgagagcaaagatcgcatgcgattgacgcgtgcttcaaaggaattaattgagaaacgt
tgcttgctgatgaaggcattcgaagaatatcgtacgaaacgtatcgatgaatggaataat
caaaagaagcgtcgtctcgagttacgttgcaatattgatactgatgagttggactcagat
tcgaagaacgtagaggaagaagttgttgaatttttcgtaaaagaggaaacattcgtaatc
gacgacaaataa
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