Trachymyrmex septentrionalis: 108750548
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Entry
108750548 CDS
T11226
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsep04040
]
108750548
Ion channels [BR:
tsep04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108750548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
108750548
NCBI-ProteinID:
XP_018345532
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MSEDSDSISEEERSLFRPFTRESLAAIGARIAEEEARQKELQQRRAEGEGGYGRKKKKKE
VRYDDEDEDEGPQPDPMFEQGAPIPVRLHNEFPPELASTPLEDIDSFYHNQRTFVVISKG
KDIFRFSATDAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTIEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKNFPEDGSWGNLTHESWARFNNNETNWYFDEAKNIPLCGNSSGAGQCLPGYTCLQGFGS
NPNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVN
LILAIVAMSYDELQKKAEEEEAAEEEAMREAQEAAIAKENKLAAREAAAAAAAAAADAAA
EAADQIVKSPSDFSCHSYELFVGQEKGNDDNNKEKMSIRSIESIGDQRHIKQINNNHSAA
NKVRKVSAVPRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFTIRNGRGRCFV
PPGGDRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLGSRHSSYTSHA
SRLSYTSHGDLAFSGIRGIDSIGKQITKQEQILRNRNNKQTPANGHVTDANQKNYHFEAP
DMEDPMGKNKPQDNPFIELPAQQHTVVDMKDVMVLNDIIEQAAGRRSKTPEQAVSTYYFP
TDDDEEPTFKDKLVAGMFRCIDIFCVWDCCWLWLEFQKYVSLLVFDPFVELFITLCIVVN
TLFMALDHHDMDKDMERVLKSGNYFFTATFGIEATMKLIAMSPKYYFQEGWNIFDFIIVA
LSLVELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIII
FIFAVMGMQLFGKNYVDHVDYFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLV
GDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAEAIDRIARFI
KWIKRNILAFAKLMRAKLTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADGELDVYRDKK
SAKELNQLEVAIGDGMEFTIHGDLKNKLKRGKLCMNNTKVIANSINHHDYRLDNDYINQN
EDDTISNKSYGSHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEEDLEDEGEEEEDRL
DVEIIQVDEDPIQSIYPADCCPENCYKKFPFLAGDDDAPFWQGWANLRFKTFRLIENKYF
ETAVITMILLSSLALALEDVHLQQRPVLQDVLYYMDRIFTVIFFLEMLIKWLALGFKKYF
TNAWCWLDFIIVMLSLINLGAVWAGAADIPAFRSMRTLRALRPLRAVSRWEGMRVVVNAL
VQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYYKCVDTNKTTLSHEIIPDRNACNTENY
TWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREIDKQPIRETNIYMYLYFVFF
IIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGNKKPLKAIPR
PRWRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTMDHYQQSVTFGNVLDYLNMIFIVIFT
SECLMKIFALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGR
VLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVY
NFKTFGQSMILLFQMSTSAGWDSVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSY
LVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLS
DFLDVLEPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEETGDL
AEVQARPDEAGYEPVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDPDTDLCVR
QTKVLVESDGYVTKNGHRVVIHSRSPSVTSRTADV
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactctatatcagaggaagaaagaagtttgttccgtccgttcacg
cgggagtccctggcagcgatcggggctcgcattgccgaggaagaggccaggcagaaagag
cttcagcagagaagagcggaaggcgagggaggttatggacggaagaaaaagaaaaaagaa
gtacggtatgacgacgaggacgaggacgaaggtcctcagccggatcccatgtttgagcag
ggagcgccgatcccggtccgactgcacaacgaatttccacccgagttggcctccacacct
ctcgaggatattgatagcttctaccacaatcaaaggaccttcgtcgtcattagcaaggga
aaggatatattcagattctcagcgacggacgcgatgtggatgctcgacccgttcaaccct
atacggcgtgtggccatatacatattggttcacccgctcttctcccttttcatcatcact
acaatattggttaactgtatactcatgatcatgcccaccacgcccaccatcgagtccacc
gaagtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggt
ttcattctgcagccttttacctatcttagagatgcatggaattggctcgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctaggcaaccttgccgctctcaggaca
tttcgagtcctccgagccttgaagactgtcgctattgtaccaggtctgaaaaccattgtc
ggcgctgtgatagaatccgtgaagaatctgcgcgatgtgataatcctgacgatgttctcc
ctctccgtctttgcgctgatgggccttcagatttacatgggggttctcacgcaaaaatgt
ataaagaactttcctgaggacggctcctggggtaatctcacccacgagagttgggcgcga
ttcaataataacgaaactaattggtactttgacgaagcgaaaaatatacccttatgcgga
aattcatcgggggcggggcagtgccttcccggatacacgtgtttacaaggattcggctct
aatccgaattacggttacacgagcttcgacacttttggttgggcattgctctccgccttt
cgtctcatgactcaggattattgggagaatctgtatcaattggtgctaagatcggccgga
ccatggcacatgctcttcttcatcgtcatcatcttcctcggatccttctatctcgtcaac
ttgatcctcgctattgtcgcgatgtcgtacgacgagttgcagaagaaggccgaagaggaa
gaagccgccgaggaagaagctatgagagaagctcaggaagctgcgatagcaaaggagaac
aaactcgcggcgcgggaagctgcggccgctgcagcagccgctgcggcagacgccgccgcg
gaggctgcggatcagatcgtcaaatccccgtcggatttctcgtgtcacagttacgagctg
ttcgtcggtcaggaaaagggcaacgatgacaacaataaggagaagatgagcatacgttcg
atcgagtccatcggtgatcagaggcacatcaagcagatcaacaacaaccacagcgctgcc
aataaagtgcggaaagtcagcgccgtccctcgcgccgctaatggccagtttacttatgcc
taccaggaaagcctgcggaaggcgagcctgagcctacccggctcaccgttcaatctgcgc
cgcagcagccgtggcagccatcagttcacgatacgcaacggccgtggccgatgtttcgta
ccaccgggaggcgaccggaagcccctcgtgctgtcgacgtacttggacgcccaggaacac
ctgccctatgccgacgactcgaacgcggttacaccgatgtccgaggagaacggcacgatc
gtggtgccggtgtattacgcgaatctcggctcgcgtcactcgtcctatacctcgcacgcc
tcgcggctctcctacacgtctcacggtgacctggccttctctggtatccgcggcatcgac
agcatcggcaagcagatcaccaagcaagaacagatcctcaggaataggaacaacaagcaa
acaccggccaatggccacgttacggatgccaatcagaaaaattatcatttcgaagctcct
gatatggaagatcccatgggtaagaacaagccacaagacaatccgtttatcgagttgccg
gcgcaacagcataccgtggtcgacatgaaagatgtaatggtgctgaacgacataatcgag
caagctgccggtcgccggagtaagacgccagaacaagcagtttcgacctattactttccg
acagacgacgatgaagaacctacattcaaggacaagttagtggccggaatgtttcgttgt
atcgacatcttttgcgtctgggattgctgttggctttggctcgagtttcaaaagtacgtg
tccctgttggtctttgatccattcgtagagctcttcatcacactctgtatcgtcgttaat
actctgttcatggcattggatcaccacgacatggacaaagatatggaaagagtactcaaa
tctggtaattactttttcacggcgacatttggcatcgaagcgactatgaaactaatagcg
atgagcccaaaatattattttcaagagggctggaatattttcgattttatcatcgtcgca
ctttcgctcgtggagttgggtctcgaaggcgtgcaaggtctgtcggtattacgatctttc
agattgttgagagtgttcaagctagctaaatcgtggcctacgttgaatctgctgatttcc
atcatgggcagaacggtgggcgcgttgggtaatctaacgttcgtactgtgcatcatcatc
ttcatcttcgccgtgatgggtatgcagctcttcggcaagaattacgtcgatcacgtcgat
tacttcccggacggtgatctacccagatggaacttcactgacttcatgcactcgtttatg
atcgttttccgagtgttgtgcggagaatggatcgaatctatgtgggattgcatgttggtc
ggtgacgtctcctgcatacccttcttcttagctaccgtcgtcattggtaacttggtcgtc
ctgaacctcttcttagctctgttgctcagcaacttcggctcatcgaacctgtcggccccg
actgcggacaacgacacgaacaagattgcggaggcgatcgatcgaatagcgcgtttcatt
aagtggatcaaacgaaatatccttgcttttgctaagttgatgcgagccaaactcaccaat
cagatatccgatcaggcgccaggtgagggaccgtccaacagttggaaagaagatgggatt
gatcgcgatggggacctagatcttgcagatggagagttggacgtatacagagacaagaag
agcgccaaagagcttaatcagcttgaagttgccattggtgacggaatggaatttactatt
catggagatctgaagaataaactgaagaggggtaagctgtgcatgaacaatacgaaagtt
atcgcgaattcaataaatcaccacgattataggctggacaacgattatattaatcagaac
gaagatgacactatcagtaacaaatcatatggcagtcacaaaaatcgcgcgtttaaagac
gaaagtcacaaaggcagtatggattcgttaaatggcgaagagaagaaagatgcgagcaag
gaagatttagaacaggaagaagatttagaagacgagggtgaagaagaggaagatcgactc
gacgtcgagataatacaagttgacgaggatcctattcaatcgatttacccggccgattgc
tgtccggaaaattgctacaaaaagtttccatttctggccggcgatgacgacgctccattt
tggcaaggttgggcaaacctgagattcaagaccttccggctgatcgagaacaaatatttc
gagactgccgtcattaccatgatccttctaagtagcttggccttggctttggaggacgtt
catcttcaacaacgacctgtcctgcaggacgtactgtattacatggaccgaatatttact
gtgatcttcttcctcgagatgttgatcaagtggctggctctaggctttaaaaagtacttc
acgaatgcctggtgctggctcgattttatcatcgtcatgctatcgctcatcaacttgggt
gctgtctgggccggtgcagctgacatcccggccttccgttccatgagaacactgagggct
ttgagacctttacgagcagtctcacggtgggagggcatgagagtagtcgttaatgccttg
gtccaagccattccatccatcttcaacgtattgctggtatgccttattttctggcttata
ttcgctatcatgggggtgcagctgtttgctggcaaatattataagtgtgtcgacacgaac
aagacgacgctcagccacgagataataccggatcgtaacgcttgcaacaccgagaattac
acgtgggaaaattcgccgatgaatttcgatcacgtcgggaaagcgtatctgtgcctattc
caagtggcgacttttaaaggatggattcaaattatgaacgatgcgatcgactctagagag
atcgataagcaaccgattcgcgaaacgaacatttacatgtatctctacttcgtgtttttc
attatatttggatcgttttttaccctcaatctgtttatcggagtaatcatcgacaatttt
aacgagcaaaagaaaaaagctggcggatccctcgagatgtttatgacggaagatcagaag
aaatattacaacgccatgaagaaaatgggcaataagaagcctctaaaagccattcctcga
ccgaggtggcggccgcaggcaatagtgtttgaaatagtgacggacaaaaagttcgatatg
ataatcatgttgttcatcgggctgaacatgctcacgatgacgatggaccattatcagcag
agcgtaaccttcggcaatgttctggactatctcaatatgatattcattgtgatattcacc
agcgagtgtctcatgaagatcttcgctcttcgctaccactatttcaaggagccatggaat
ctctttgattttgttgttgttatattgtcaatattaggtctggtgctcagcgacattatt
gagaaatatttcgtgtcgccgactttgcttcgtgtagtgagagtggcaaaagtcggtcgt
gtgcttcgactcgtaaaaggtgccaagggtatccgaacccttctcttcgccctggcgatg
tcgttgccagccctcttcaacatttgcctactgttgtttttggtgatgtttatcttcgcg
atattcgggatgtctttcttcatgcatgtcaaagacaagagcggactggacgacgtgtac
aatttcaagacatttgggcagtcgatgatactgttgtttcagatgtcaacctcggccggt
tgggacagtgttcttgacggtataataaacgaggaagactgccaggagccgaacaacgag
atcggctacccgggcaactgcggatcctcgacgatcgggatcgcttacctactctcgtat
ctcgtgatcagcttcctgatcgtcatcaacatgtacatcgccgtgatcctcgagaattac
tcgcaggccaccgaggacgtgcaggagggtctgacggacgacgactacgacatgtactac
gagatttggcagcagtttgatccggacggcacgcaatacatcagatacgaccagctgtcg
gacttcttggatgtattggagcccccgttgcagatacataagcccaataaatataagatc
gtgtcgatggatatccccatatgtaagggagaccttatgttttgcgtggatatcctcgat
gccctcaccaaggactttttcgcacggaagggcaatccaatcgaagagacgggcgatctg
gccgaggtccaggctcggcccgacgaggccggttacgagccggtctcgtccactctgtgg
cgacaacgcgaggagtactgtgctcgtcttatacagaacgcctggcggaagcacaagcag
cagcgtcttggcggaccgagcgaggagagcgacgacccggacaccgatctgtgcgtccgg
cagaccaaggtgctcgtcgagagcgacggctacgtcacgaagaacggtcaccgcgtcgta
atacacagccgatcgccgagcgtcacttcgagaaccgcggacgtctga
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integrated database retrieval system
