Trachymyrmex septentrionalis: 108751014
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Entry
108751014 CDS
T11226
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108751014
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108751014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
WHD_plant_repro
DUF948
AAA_27
DASH_Dam1
Motif
Other DBs
NCBI-GeneID:
108751014
NCBI-ProteinID:
XP_018346436
UniProt:
A0A195F6S7
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MNNNIEEGIITCIHLENFVTYDKLTVTPGRYLNVIVGPNGSGKSTIVAAIVLGLGGKPSI
IGRALHIGDYVKYGRDSAKIEIHLKNGFKQDSVITRTFTKEGKSVWMINGNHANSKNIQE
FTSKLNIQVSNLCQFLPQDKVQDFSKMDAQALLENTERSVGDPKLLEYHLKLKNQRVDFK
KLEVDIINTKRLLESKTQRRDGLQQTVATIKEKKLIKKKIVTLKQKKAWMLYDQMRRKLV
ESKKTRDKAAKEMQLIDKKLQPLNKKIENIKIEITTLKNSLKDHNNKVNAKNAKLRNIMN
EILNCENSIKDAENICSRNIQAEQTRDQDIKFAQQQKSKLENDFSLTINEMGSEESLMEQ
MQNIAFNIEEHRKGIKNLTNKNITLKHEDENISREMRVVQAELQTINIDVKRLELLKQRD
VNAYKAVLWLKENRDKFSAPVHMPMLLNINVKEASYAKYLENIIPFRDLVAFTCENKIDM
HVLLKCLREQQKLKVNVVHSDPKKDVTLQPNIPIENIQKFGFKHYLVELIEVPPSILKYL
VLMYRLNNIPVGTNEIENNINYIPRNLNCYFSENNIYSVSTSKYTHETSTRISRVRGNGM
LSIVLDKFKLQNLQERLQNLQEKKNEISINIKEIEEKLHLKTKTLDEYRANRNKCQQNVQ
HIQALKGRIHIAEDRLRQLEMGRMNIDDIKATYTNEIKAIIKKQLKLYKEYNGILQECFN
CNTNNVEVKFAITLLQQTLLFKETEADELKDKFIAAERIFKRHDEEFQPLKKEAERLYKE
ALTTTNNINPQDDAFKAFNKAFEKLPATIAEINNELNIAQAKVFCMAQNVDAENILREYE
EMQNSIHDLTEFIKEKSILLEQMTKEIETLKEKWLQPLQQLIEKINANFSSYFFAMDCAG
EVTLSHGENILDFDQYGLKIKVKFRDADELQELTRHFQSGGERTVTTAIYMIALQELSRV
PFRCVDEINQGMDAVNERRVFNLLVKMTGRPGSSQYFLLTPKLLPKLSYTETVTVHCVFN
GTVKANNEDFEFDVKDYCNHLTSSDE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaacatcgaggaaggcattatcacctgcatacatctggagaattttgtgact
tatgataaactgacagtgacaccaggaagatatctcaatgttatcgttggacctaatggt
tctggcaaatccaccattgtcgccgctatagttcttggtctaggaggtaaaccaagtatc
attggacgggcccttcacataggagattatgtgaaatatggacgggattcggcaaaaatt
gaaattcatctgaaaaatggctttaaacaggattctgtaataactaggacatttaccaaa
gaaggaaagtccgtatggatgattaatggtaatcatgcaaattccaaaaatatacaggaa
ttcacatccaagcttaatatccaggtcagcaatctttgtcaatttttgccgcaagataag
gtacaagatttctcaaaaatggatgctcaagcattgttagaaaatacagaaagatctgtc
ggagatccaaagcttcttgagtatcatctaaaattgaagaatcaaagagtcgattttaag
aaattggaagttgatataatcaatacaaaacgattattggaatctaaaactcagagacgt
gatggactacaacaaactgttgcaacaataaaagagaaaaaattgataaagaaaaagata
gtaacactgaagcaaaagaaggcatggatgctgtatgatcaaatgcggaggaaattagta
gagtcaaagaaaaccagagataaggcagcaaaagaaatgcaattaatagacaaaaaactt
caaccgttaaataaaaagattgaaaatataaagattgaaataacaacgttgaaaaattct
ttaaaggatcacaataataaagttaatgctaagaatgcgaaattaagaaatatcatgaat
gagattcttaactgtgaaaacagcatcaaagatgcagaaaacatatgttctcgaaacatt
caggcagaacagactcgagatcaagatattaaatttgcacaacaacagaaatccaaactc
gagaatgatttttctcttacgattaatgaaatgggatcagaggaaagtttaatggaacaa
atgcaaaatatagcatttaatatagaggagcatagaaaaggaattaagaatctcactaat
aaaaatatcacattgaagcatgaggacgaaaacattagtcgcgaaatgagagttgtgcaa
gcggaactccaaacaattaatattgatgtgaaacgattagaattgctgaaacaaagggat
gtgaacgcatacaaggctgtactgtggttaaaagagaatcgagacaaattttctgcacca
gtgcatatgccaatgttactcaatattaatgtaaaagaggcttcatacgccaaatattta
gaaaacataataccgtttcgagatttagttgcatttacatgtgaaaataaaatagacatg
catgttttacttaagtgtttgagggaacaacaaaaactgaaagtaaatgttgtacattct
gatccaaagaaagatgtcacattgcaaccaaatatcccgatagaaaacatacaaaaattt
ggcttcaagcattatttagtagagcttatcgaagtaccgccctccatactgaaatattta
gttttgatgtatcgtttaaacaatatccctgtcgggactaatgaaatcgagaataatata
aattacatacctcgcaacttaaattgttactttagtgaaaataatatatattctgtaagt
acatctaagtatacgcacgaaacatcgaccagaatatcgcgagttcgtggaaatggaatg
ctatctattgttctggacaaatttaaactacagaatcttcaagaacgattacaaaatttg
caagaaaaaaagaatgaaatttcgataaatattaaagaaatagaagaaaagttacatttg
aaaacgaaaacattagatgaatatagagccaacagaaataaatgtcaacaaaatgttcag
catattcaagcattaaaaggtagaatacacatagctgaagatagacttaggcaattggaa
atgggccggatgaatattgatgatataaaagcaacatacaccaatgagattaaggccatt
ataaagaaacaattaaaattgtataaagaatataatggaattctgcaagaatgtttcaat
tgcaatacaaataacgtagaggtcaaatttgcaataacattattacaacaaactttatta
tttaaagagactgaagccgatgaattaaaggataagtttatagcagcagagagaatattt
aaaagacatgatgaagaattccaacctttaaagaaagaagctgaaaggttatataaggaa
gcattgacaaccacaaataatatcaatccacaagatgatgcatttaaagctttcaataag
gcctttgaaaaattaccagctactatagctgaaataaataacgaattaaatattgctcaa
gcaaaagttttttgtatggcacaaaatgtggacgccgagaatatactgcgtgaatatgaa
gaaatgcaaaatagtattcacgacttaactgaatttatcaaagagaagagtattttacta
gaacaaatgacaaaggagattgaaacattaaaagaaaagtggttacaaccattgcagcaa
ttgattgaaaaaattaacgcgaattttagttcttatttttttgcaatggactgtgctggc
gaagttacgctctcacatggtgaaaatatcttggattttgatcagtacggattaaagatc
aaagtaaaattccgagatgcggacgagttgcaagaattaacaaggcattttcagagtggt
ggggaaagaactgtaactactgccatttacatgatagcgctgcaagaattatcgcgtgtg
ccatttcgctgtgtagatgaaattaatcagggcatggatgcggtgaacgagagacgagtc
ttcaatttactcgtcaaaatgacaggaaggccaggcagctctcaatattttttgcttaca
ccgaaacttctgcccaagttatcatatactgagacagtaacggtgcattgcgtctttaac
gggacagttaaggcgaataatgaagattttgaattcgatgtaaaggattactgcaatcat
ctcacatcatctgatgaatag
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