Trachymyrmex septentrionalis: 108751018
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Entry
108751018 CDS
T11226
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108751018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108751018
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108751018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
SapB_1
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
108751018
NCBI-ProteinID:
XP_018346442
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MRNMTLTEMEPLKMHLDSLEMAGKMVDKHIIADSNFPSLINLMRYNVQGGPTVSGLDDHD
YPNLNGASMTLTNINQMKMLNKIPLPSEVMEHFGHMQCHCMMGLFTEISKAWLTIDSDIY
LWSYENESDVAYFDGLNETIISVGLVKPKTGIFQSYVKYLLILTTTVEITILGVTIPDAG
GEMQLVPEPIFTVTTDGIGITTIANTNSGRIFLGGRNGSLFEIYYQAESSWFGKRCKKVN
HSEGPLSFLVPSFVTMALSEEEAIIQISVDDSRNILYTLGDRGTITVWDIDNGGASKITS
LSQASLVQNTVHVVKTLDSNNFRPLVSISAIMESESVHLNLVVVAATGTRFYFSCTSISN
PSSRPQGLQLIHVRLPPGYAANAPVMRPRKVQMAYYRKGTLFLVCGGDTETAWCLSNDAY
PFTNYLAETQSILPLDSPAWAMEEIIRDSAIHIEKQSSAQGEPPLLVRQHMEPPRKFIFL
TAQGAIILMQVRPVDILKQVLLEQRGPDTEVVRAYFQTQSLEQACATCLILATLESSQNA
QLSEWATRAFFLYGGQRIAGIYPPIDMHSGFPIIPADLRTSTPRVPTFDSRIQSFRSPTQ
MGLTTDISLQHFSAKHSGLYLYVGRILRPIWNVRCIKQETISNKNVISSTVPATQITWIL
GHLQALRSFLNRNTHITKQQNTSSGLTDGFETTMQSHFQEPIVEERNSLDALKVFITHAC
EVLGLWKILCENQLNNIINCLSKDQITQFSTATFRDLILIGHEISSLLIVHLIDSYLGDN
ASVDSVSAKLREVCPNLYRTEDAVCSKANEILLKAKGCTNPEDKECYLQSALMLCKEVAP
RLNLNAVCQQFVACQFYTGVLELCICCAERIDPNNAASHYYKNNEPIEDQEGNLAFTKRS
EIYKEFTTMLDHLYHQSISNPLTPTIPSKPGPPLQTTSNAVVIPAKEILHEIIDDALHAP
CETLHSSIYTWMIDRGLHGELVAFAAPSLETYLNRVNAPELLWQFYERNKNHAAAAKILD
SLATKVGAEISLSKRVEYLARAVVCMRSDQTGYAPYLGIFLRELEDKLEVARMQQQILEI
ISNQQNLFDSMIVTDAKLRLNSSLLDITQLYEDYAEPLQLWECKLAIIHCSGHQDDMLIK
GIWTNIIDNELENATEPSNEDKITILMCKIKVLGQEYIGSPHCFPIDFLVKQLEMKACKY
KVTNTSIITSFLELGVAMEDLLDIYDKMIGKNTRIWLNEGNEFHLIESTANLVNHFIKNM
TVTNNFVRRKIITKCQDVISKCLTTLFSKPNGGELEREITNLRSIQSILNRM
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatatgacgcttacagaaatggagcctttaaaaatgcatttagactcgttagag
atggctggaaaaatggtagataaacatattattgcagatagcaattttccatccttaatt
aatcttatgcgatacaatgtgcaaggtggaccaaccgttagtggtctcgatgatcatgac
tatcctaatttaaatggtgcatcaatgactttaacaaatattaatcaaatgaagatgctt
aataaaattcctttgccttctgaagtcatggaacactttggccatatgcaatgtcattgt
atgatgggccttttcacagagatttcaaaagcatggcttacaattgatagtgacatttat
ttgtggtcatatgaaaatgaatctgatgttgcttactttgatggtttgaatgaaactatt
ataagcgtaggcttagtaaaacccaagacaggaatcttccagagttacgtgaaatacttg
ttaattcttacaacaacggtagaaataactattcttggtgtgacaatacccgatgctgga
ggagaaatgcagttagttccagaaccgatctttactgttactactgatggaataggaatt
actacaattgctaatactaatagtggcagaatatttcttggtggtagaaatggatcactt
tttgaaatatattatcaggcagagagcagctggttcggcaaacgttgtaaaaaagttaat
cattcagaaggtccattatcatttctagtgccatcatttgtcactatggcactgtcagag
gaagaagctataatacagatatctgtggacgattcgcgtaatattttgtatactttgggt
gatagaggcacaattacggtttgggatattgataatggtggcgcatctaaaatcacttca
ttatctcaagcttctttggttcaaaatactgttcatgttgttaaaactctggatagtaac
aattttcgacctcttgtaagcatatcagccataatggaatccgaatcggtacacttgaat
ttggttgttgttgcggcaacaggaactcgtttttacttcagttgcacttctatttcaaat
ccgtcgagtagaccacaaggtttacaattgatacatgtcaggctaccaccaggctatgct
gcaaatgctccagtaatgagaccacgaaaagtacaaatggcctattatcgaaagggcact
ctttttcttgtttgtggtggtgatacggaaaccgcatggtgtttgagtaacgatgcttat
ccattcacaaattacttggctgaaactcaaagtattttgcctcttgatagtccagcttgg
gctatggaggaaatcataagagattcagctatacacatagaaaagcaaagtagtgctcag
ggtgaacctcctctattagtgcgccaacatatggagccaccaaggaaatttatattctta
acagcacagggagcgataatcttaatgcaagtccgtcctgtagatatactgaaacaagtt
ctcttagaacaacgtggtcctgatactgaagtagtacgcgcatattttcaaacacaatct
ttggaacaagcttgtgctacatgcctaattttggcgacacttgagagttctcaaaatgct
cagttgtcggaatgggcaactcgcgcattctttctatatggtggtcaaagaatagcagga
atatatcctccgattgatatgcattctggtttccctatcataccagcagatttacgcaca
tctacgcccagagtgccaactttcgattctagaatccaatccttccgatcacctacgcaa
atgggacttaccacagacattagtttgcaacatttctctgctaaacatagcggattgtat
ttgtatgtgggaagaatacttcgtcctatatggaatgtaagatgtataaaacaagaaaca
ataagtaataaaaacgtgatttccagtacagtaccagcaacacagattacttggatctta
ggtcatttgcaagcacttagatctttcttaaatagaaatacacatatcacaaaacaacaa
aacacaagtagtggtttaacagacggttttgaaacaacgatgcaaagtcattttcaagaa
ccaattgtggaagaaagaaactccttggatgctttaaaagtttttattacgcatgcatgt
gaggttttgggtttatggaaaatattatgcgaaaatcagctaaataatatcatcaactgt
ctatcaaaagatcaaattactcaattttctacagccaccttcagagatttgattttaata
ggccacgaaatatcttctctactcatcgttcatttgattgatagttatcttggggataac
gcatcagtggattccgtaagtgcaaaattaagagaagtctgtcccaatttatatagaact
gaagatgctgtttgctccaaggcaaacgaaattctcctgaaagcaaaggggtgcacaaat
cccgaggataaagaatgttatcttcagtctgctttaatgctttgtaaagaggtagcaccg
aggttgaatctgaatgcagtgtgccaacaatttgtcgcatgccagttctacacaggtgta
cttgaattgtgtatttgttgtgcagaaaggatagatcccaacaacgctgcttcacattat
tataaaaataatgagcctatagaagatcaagaaggaaatctcgcttttacgaaacgttca
gagatttataaggaatttaccacgatgttagatcacttgtatcaccagagcatctctaat
cctttaacgccaactataccgagcaagccaggacctcctttacaaacaacatcaaatgct
gttgtaataccggcgaaagaaattttacatgagatcatagacgatgcactacatgcacca
tgtgagactcttcattcctcgatttatacttggatgatagacagagggcttcacggtgaa
ttagttgcttttgctgcaccttcgttagaaacttatctcaaccgtgtcaatgcgcctgaa
ttactttggcagttttatgaaagaaacaaaaatcatgctgctgcagcaaagatcttggat
tctttggctaccaaagtcggagcggaaatatcgctctcaaaaagagtcgaatatttagca
cgtgcggttgtatgtatgcgaagcgatcaaactggatatgctccttaccttggaattttc
ttacgcgaattagaagataaattagaagtagctagaatgcaacagcagatacttgagatt
atcagtaatcagcaaaacctgttcgattcgatgatagttacagatgcaaaattgagatta
aattcttcattacttgatattacacagttatatgaagattatgcagagcctttacaactt
tgggaatgtaaactagctattattcactgctcgggtcatcaagatgacatgttaattaaa
ggaatttggaccaatataattgataatgaattagaaaatgcaacggaaccatcgaatgag
gataaaataactattttaatgtgcaaaattaaagtacttggtcaagaatatatcggatca
ccgcattgttttccaattgattttttagtaaaacaattggaaatgaaagcatgtaaatat
aaagtaactaatactagtattataacttctttcttggaattaggagtagcaatggaagat
cttttagatatttatgataaaatgattggtaaaaatacccgtatttggttaaatgaaggt
aacgaatttcacttgatcgaatcaacagcgaacttggtaaatcatttcataaaaaacatg
actgtaacaaacaattttgtcaggagaaagataataacaaagtgtcaagatgttatttcg
aaatgtttaacaactctctttagtaaacctaatggtggagaactcgaaagagaaataaca
aatttgcgttcaattcaaagtatattgaatcgtatgtaa
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