Trachymyrmex septentrionalis: 108751087
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Entry
108751087 CDS
T11226
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108751087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108751087
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108751087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
108751087
NCBI-ProteinID:
XP_018346543
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MRVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVT
FSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLR
SYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEP
RDSSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQMGGPMMGGPMGPPGNMMQQY
QGWGTSPQTGGYAGYSTQYNAQGWGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAATQGYG
SYGGPAAAASGGYGPTAGTGGAAGGGPGGSWSSWNMPQNGPPPGTQPPPQPPQPNSSQPN
SNSNPSGPQGDMYSRQNTGSGAPGSSSSSAKTPDYTGYSAYSNYADTSYPQRSYQGGENS
QDVLSIPKFKTVETGSPTFIPNGDAAPGPQRFSLTQHTNYHPYRR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaagaccgaaatggacgacgacgaaaagggaaaattgttcgttggtgggtta
tcatgggagacaacccaagaaaatctccaacgttattttggccgttatggtgaggttatc
gattgcgttgttatgaaaaatagcgaatctggacgtagtcgtgggtttggatttgtaaca
tttagcgatcctgctaatgtttctttggttcttcagaatggtcctcatcaacttgacgga
cgtacaattgatccaaaaccatgtaatccacgtactcttcaaaagccaaagcgcagtggt
ggctttccgaaagtctttcttggtggcttgccaagtaatgttacggagactgatttaaga
tcttattttactcgctttggtaaagtcatggaagtggtcataatgtatgatcaggaaaag
aaaaaatcaagaggattcggctttctcagctttgaggatgaagaagcggtggatcgttgt
gttgcagaacattttgtcaacctgaatggaaagcaggttgagattaaaagagccgaaccg
cgggactcatcgagcaaaatgaacgatagtcatcagggtcaatggggcccacctcagcaa
ggtggcccgccgatgggaatggccggaaatatggggcctatgggtggaccaaatggtcag
atgggtggacccatgatgggtggacccatgggtccgcctggtaatatgatgcaacaatat
cagggttggggtaccagtcctcaaactggtggatatgcgggatatagcacccagtataat
gctcagggttggggcgcaccaccaggaccgccccagcagcagcaaatcccgccgccgcca
ccgcatcagtggggtagtagctataatgttcaacctgctgcagctactcaaggttatgga
agttatggtgggccggcggcggccgcttcagggggctacgggcccacggcgggtactggc
ggggctgcgggaggcgggcctgggggctcttggagctcctggaacatgccacagaatggg
cctcctcctgggacccagcccccaccccagccccctcagcctaactcctcgcagcccaac
tccaactcgaacccctctggcccgcagggtgacatgtattcgcggcaaaataccggttca
ggtgcgccaggatctagcagcagttcagccaagactccagattatactggatattctgca
tacagtaattacgctgatacttcttatcctcagcgttcgtatcaaggaggagaaaatagt
caagatgttctctcgattcccaaattcaaaaccgtcgaaactggaagtcctaccttcatt
cccaacggagacgcagctcctggtcctcaacggttttccttgacccaacacacgaattac
catccctataggcgctaa
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