Trachymyrmex septentrionalis: 108751241
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Entry
108751241 CDS
T11226
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03460
Fanconi anemia pathway
tsep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108751241
09124 Replication and repair
03460 Fanconi anemia pathway
108751241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsep04121
]
108751241
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108751241
Enzymes [BR:
tsep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108751241
Ubiquitin system [BR:
tsep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108751241
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
108751241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
zf-RING_2
SLX1_C
PHD_NSD
AATF-Che1
FANCL_d1
RINGv
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108751241
NCBI-ProteinID:
XP_018346821
UniProt:
A0A195F6U6
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MTTKHNYNYEEILKWHPEMILISESPVTWQGFLLVSELYPAGNIRCLRVKVKLVMPNYPS
FDKARINFDKHIAFLRNIEFSREVKESMKSQKKTVSSFLSQLQLLIGKYIHTSSKVCIPF
DFESTRDFLHDIKAALQNQSDVQLSCDRNLSTIKLSLREIFLTLQRCKDIDIPWKVVSSN
MPENFEKIVLSKNLNIVTTKFKWQVEILERAWEQLKEIDENCWVIDPPKPNKSHMHRRIH
LSQSISVTITIDPVVPTAAPTIQFSGSDNEVKRQMEDVSNNIHNWNPDCNILDNLRMLLN
MYTFPEQQDSLDDSQGVISNRECGICFSETSETDELPNKICNNHKCMKHFHSVCLSKWLQ
TNAANQVVFSHIYGNCPHCKEDIACPIEC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaacacaattacaattatgaagaaatcttgaaatggcatccggagatgata
cttatttcagaatcgcctgtcacttggcaaggttttctacttgtctcagaattgtatcct
gctgggaatattcgatgtctcagagtaaaagtgaaactagttatgcccaattatccatca
tttgataaggcacgaatcaactttgataagcatattgctttcctgcggaacatagaattc
agcagagaagtgaaggagtcaatgaagtctcaaaaaaaaactgtatcatcatttttgtcg
cagttacaattacttattggtaaatatatacatacaagtagtaaagtttgtataccgttt
gactttgaatctacaagagactttttgcatgatataaaagcagctcttcagaatcagtct
gatgtgcaattgtcatgcgatcgaaatctgagtactatcaaattatccttaagagaaata
tttcttacattgcaaagatgtaaagatattgatattccctggaaagtagtatcttctaac
atgcctgaaaactttgagaagatagtattgagcaaaaatttgaacattgtgacgacaaag
ttcaaatggcaagtggaaatactggaaagagcatgggaacaattgaaagaaattgatgag
aattgttgggtaattgacccaccaaaaccaaacaaaagtcacatgcacagacgcattcat
ttgtcgcaatctatatctgtaacaattacaatagatcccgttgttcctactgctgcgccg
acaattcagttctcgggcagcgataacgaggtgaaaagacaaatggaagatgtttccaat
aatattcataactggaatccggattgtaatattttagataatttgaggatgttgttaaat
atgtacacatttcccgagcagcaggacagtttggacgattcgcaaggtgttatcagtaat
cgtgaatgtggtatatgcttctctgaaacatcggaaactgatgaattgccaaataagata
tgcaataaccataagtgcatgaaacactttcattcagtatgtttatcgaagtggttacaa
actaatgctgcgaatcaagttgtatttagtcatatctatggcaattgtccacattgcaag
gaagacattgcttgtcccattgaatgttga
DBGET
integrated database retrieval system
