Trachymyrmex septentrionalis: 108751468
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Entry
108751468 CDS
T11226
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108751468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsep03021
]
108751468
Enzymes [BR:
tsep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108751468
Transcription machinery [BR:
tsep03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108751468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
108751468
NCBI-ProteinID:
XP_018347197
UniProt:
A0A195FVZ8
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
MTSKYHHKQRLTPKHRDSLRLIFSVFTANDIRNLSVTKIITSLTFNILGHPLKGGLYDPS
LGITKNSSELCSTCGYNSSKCPGHFGHIELPVPVVNPLFHKALSMLLKLSCLSCFTLQVP
SYIKLWLSAKLKLLYQGQLSDLDGLDHEVTSILSNIEKEEERTEYIRNVIDIYMQNFLNR
NRYSQIMPQNPENQANIKSVIMQWHAYIENILKRYVRTNKAGICMNCHNGLPKMSTLQNK
IMISNKEIVKNSKEMLSREVAHKFEMIMIMPDQSKEYLRQLWHNERDFLKIILPCLELVD
IEYPTDIFFFEVIPVLPPIVRPVNFLNGQMVEHPQTHIYKSIIQDCLVLRNVIQTIQDGG
IDHLPQEGRLVFEQIKGTTAVEKLHNAWQALQSNVNHLMDRDMNKSEVINSQGLKQILEK
KEGIIRMHMMGKRVNFAARTVITPDPNLNIDEIGIAEAFARKLTYPTSVTPWNVIELRRL
VLNGPNVHPGAVMVENEDGSIQAISSNDCTQREAIAKRLLTTSDRTNEFIGVKIVHRHLQ
NGDVLLINRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDELNAHFPQNEL
ARSESYNIANVSNQYLVPKDGTPLSGLIQDYMVSGVRLTTRGRFFSKAHYTQLVYTALPI
MQKDIILLPPTIIKPKMLWSGKQILSTVIINIIPSHKTRINLISSTKIRAKEWQTEIPRR
WKCGTEFKNSMTMSEAQVIIRHGELLCGVLDKMHYGATPYGLIHCIYELYGAICANEMLS
AFGRLFQMFLQCDGFTLGVEDILITPEINEKRKEIISNCRKIGETVQKSVIKAPNDTPMN
EIQSKMEESYWNNSKFRAQVDHKYKSTLDVYTNDINNVCLQMGLFKKFPNNNLQLMVQSG
AKGSTVNTMQISCLLGQSELEGKRPPLMISGKSLSSFPAYDPTPRAGGFIDGRFMTGIKP
QECFFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLIVSYDATVRDYDGSLIQFYYGE
DGLDVPGSRFLTKNQIAFLVDNKESIMDAKLLECLKRNDKEIAKTIKKIKRWEIKNGSSL
QKRRINEFSKFSMENSNQNNVKQKIIDSHSGRSKAALSLIRKWMRTEKELKESYHAQCTR
CPDPIMSKYRQDVEFGVLSERIESLMDEYLSRPTKIKKSVLRDLLSIKVMKTICPPGEPV
GLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMIASKNIKTPSMEIPFQNN
LENLEKQAKKLRSRLTKCVLRDVLKDITISRRMEGSPHRRLVHTLKIKYLPHKYYKEEFS
VHPRDVIKCTEEQFFKNIFKEIKKFAAISKVLIKLHFEGEKRRINDEDAAIDEIDPDEVV
PENPESRTRMDLGEMHESSDEEEAAEDADATMTKSLLRHRENQEYEDPEEEEENEDIVLN
DKEEAVDNNNANTILEDKEDDDDDTNKKLNRRKNNNNKSTSGKDRVLDMYKNAMDYDYDE
NKLSWCKFTFWLPLKTIKLDLPTIIKNAANKTVLWETKCIKKAFTFQNNKGETILKTDGL
NIVEMFKYDNILDLNRLYSNDIYNISQTYGIEAANRVIVREIKDVFKMYGITVDVRHLSL
IADYMTFDGTFKPLSRKGMENSASPLQQISFESSLGFLKTATLQGKKDDILSPSSRLMLG
QPCKSGTGAFSILPSLYNM
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgactagtaaataccaccataaacaacgtttaacaccaaaacatcgagattccttacga
ttaatattctcagttttcactgcaaatgatataaggaacttgagtgtaacgaaaatcata
acatcattaacttttaacattcttggacatccattaaagggtggattatacgatccatct
ttaggcataacgaaaaacagttcggagctgtgcagcacatgtggatataatagttccaag
tgcccaggtcattttggtcatatagaattaccagtacctgttgtcaatccattattccac
aaagcattgtctatgttgcttaaactgtcatgtttaagttgcttcacattacaagtacca
tcgtatatcaagttatggctgtccgcaaaattaaaattactgtaccaaggacagctcagc
gatcttgatggtttggatcacgaagtaacatccatattatcgaatattgaaaaagaagaa
gaacgaacagagtatattcgtaatgtaattgacatttatatgcaaaacttcctcaataga
aatagatatagccaaatcatgcctcagaatcctgagaatcaagctaatataaagagtgtc
attatgcaatggcatgcatatattgaaaatatacttaaacgatatgtgagaaccaataaa
gctgggatatgcatgaattgtcacaatggtcttccaaaaatgtcaacattgcaaaacaag
ataatgataagcaacaaggaaattgtgaagaattctaaagaaatgctttcgcgcgaagta
gcgcacaaattcgaaatgattatgattatgccagatcaatccaaggaatacctacgacaa
ttatggcataacgaaagagattttctcaaaataattttaccttgcttagaactggtagat
atcgaatatcctactgatatattctttttcgaggtaatacctgtactaccaccgatcgtg
cggcccgtaaattttcttaatggtcaaatggtcgaacatcctcaaactcatatctataag
agcattatacaggattgtttagttttgagaaatgttatacaaactatccaagatggaggt
attgatcacctacctcaggaaggtcgacttgtctttgaacaaataaaaggaactacagca
gttgaaaagttgcacaacgcttggcaagcgttacaaagcaatgtgaatcacttgatggat
cgcgatatgaacaaatcagaggtcatcaatagtcaaggcttgaaacaaattcttgaaaaa
aaagaaggtatcattagaatgcatatgatgggtaaaagagtgaattttgccgcacgtaca
gttattactccagatcctaatttaaatatcgatgaaattggcattgctgaggcttttgcc
cgcaaattaacatatcctacatctgtaacaccatggaatgttattgaattgagacgatta
gtcttaaacggtcccaatgttcatcctggcgcagttatggtggaaaatgaagacggatcg
atacaagctattagtagtaacgattgtacgcagagggaagctatcgcaaaacgtctctta
acaacgagtgatagaaccaacgagtttattggtgtgaaaatagtacatcgacatcttcaa
aatggcgatgtattgctaataaatagacaaccgacattacataaaccgagtataatggct
cacaaagcgcgtgtcctcaaaggagaaaaaacattacatcttcattatgcgaattgtaag
gcgtataacgcggacttcgatggagatgagcttaacgctcatttcccacaaaatgaattg
gctagaagcgaaagttataacatagctaatgtatccaaccaatacctcgtgccaaaagat
gggactccattgagtggccttatacaggattacatggtgtctggagtacgactgacaact
agaggtagatttttttcaaaggcgcattacacgcaattagtttatacagcattgccaata
atgcaaaaggacataattcttttaccgccaactattattaaaccgaaaatgttgtggtcg
ggtaaacaaatcctttcaacagtcatcattaatattattccctcgcataaaacacgaatc
aatttgatctctagcacgaaaattcgtgcgaaagaatggcaaacagagataccacgacgt
tggaaatgtggaacagaatttaaaaattcgatgaccatgtcggaagcacaagttataatt
cgacacggagaattattatgtggagtactcgataaaatgcattacggtgcgactccttat
ggtcttattcattgtatttacgaattatatggagcaatatgcgcgaatgaaatgttaagc
gcgtttggtaggctattccaaatgtttctacagtgcgatggttttactctcggtgttgag
gacattctaatcactcctgaaatcaacgaaaaacgtaaagagatcatttctaattgtaga
aaaattggagaaactgtacaaaaatcggtgataaaagcacctaatgatacacctatgaat
gaaattcaatctaaaatggaagaatcttactggaataattcaaaatttcgcgcgcaagtt
gatcacaaatataagagcactttagacgtttataccaatgacattaacaatgtttgtcta
cagatgggacttttcaagaagttcccaaataataatttacagctcatggtgcaatctggt
gcaaagggatctacggttaatactatgcaaatatcatgtttgctcggtcaaagcgaactg
gaaggtaaaaggccaccgttgatgattagcggaaaaagtttatcaagtttcccagcctac
gatccaacacctagagcaggtggttttatcgacggcagatttatgaccggcatcaaaccc
caggaatgttttttccattgtatggcgggacgcgaaggtcttatcgatactgctgtaaaa
actagtaggtctggttatttacagagatgtttagttaaacatctagaaggtttgatcgtt
agttacgatgcgacagttagagattatgacggtagcttaattcagttttattatggagag
gatggtctcgatgtaccgggttcacgttttctaacaaagaatcaaatcgcatttctagtt
gataataaagagtctattatggatgcaaagttattggaatgtctgaaaagaaatgacaaa
gagattgcgaagacgataaaaaagatcaagagatgggaaattaagaatggttcctcgttg
caaaagaggaggatcaatgagtttagtaaattctctatggagaattccaatcagaataat
gtgaaacaaaaaatcattgatagtcatagtgggagaagcaaagctgcattatcgcttata
agaaagtggatgaggacagaaaaggaactgaaagagtcatatcatgcacaatgtactaga
tgtcccgatccaataatgtcaaaatacaggcaagatgttgaatttggagtattatctgaa
cggatagaaagcttaatggacgaatacctctctcgtccgacaaaaattaaaaagtctgtt
ttgagagatttattatccatcaaagttatgaaaacaatttgtccgcctggtgaaccagtt
ggtttattagcagcacaatctataggtgaaccatctactcaaatgactttgaataccttc
cattttgcaggacgtggagaaatgaacgtaaccttaggtattccaagattacgtgaaatc
ttgatgatagcatcgaaaaacataaaaactccaagtatggaaataccattccaaaataac
ttggaaaatcttgaaaaacaggcgaagaagctgagatcaaggttaacaaaatgcgttcta
cgcgatgtattaaaagacataacaataagcagacgaatggagggaagcccacaccgaaga
ttggtgcacactttaaaaatcaaatatcttcctcataaatactataaagaagagttttcc
gttcatccgcgggatgtgattaaatgtaccgaagaacaattttttaagaatatatttaag
gaaattaaaaaatttgccgctatttctaaagttttaataaagttacatttcgaaggagaa
aaaagacgaataaacgacgaggacgcagcaatagatgaaattgatcctgacgaagttgta
ccggagaatcctgaaagcagaacacggatggatttaggagagatgcacgagtcatccgat
gaagaggaagccgcggaagacgccgatgctacaatgactaaatcattattgcgtcatcga
gagaatcaagaatatgaggatcctgaagaagaagaagaaaatgaagatattgtattaaat
gataaggaagaggcagttgataataataatgcaaatacaattctcgaggataaggaagat
gatgatgacgatactaataagaaattaaatagaaggaagaataacaataacaaatctacc
agcgggaaggatcgtgtcttggatatgtataaaaatgcaatggattatgattatgacgag
aataaactatcatggtgcaaatttaccttttggttaccgcttaaaacaatcaaattggat
ttgccaacaataattaagaatgctgcgaataaaactgtcttatgggaaacaaaatgtatt
aagaaagcttttacatttcaaaacaataaaggcgaaacgattctcaaaacagatggtctc
aatatagtggaaatgttcaagtatgataacatacttgatttaaatagattatattctaac
gacatttataatatttctcaaacatatggaattgaagccgcaaatcgagttattgtaaga
gaaattaaagatgtcttcaagatgtatggcatcaccgttgacgtaagacatctgtcctta
atcgcagattatatgaccttcgatggtacgttcaaaccactcagtcgaaaaggaatggag
aattctgcttcaccattacagcaaataagtttcgaaagttcgctaggctttttgaaaacg
gcgacattgcaaggaaaaaaagatgatatattatcaccttcgagtagattgatgttagga
caaccgtgcaaatctggaactggggcattttctattttaccatcattgtacaacatgtaa
DBGET
integrated database retrieval system
