Trachymyrmex septentrionalis: 108751616
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Entry
108751616 CDS
T11226
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
tsep Trachymyrmex septentrionalis
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108751616
Spliceosome [BR:
tsep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108751616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
DUF5558
CBM-like_CFAP184
Motif
Other DBs
NCBI-GeneID:
108751616
NCBI-ProteinID:
XP_018347390
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MAQNNYFGFTHGGTQYGATSAAAYQTGQAGYAVTPAATAATYTQRPAAAAATGYETYQAA
AAAAATGTTYAAANPGTVAQTYDYGYGRAAPAATYDATKTYYQQPAAAAATYTTTETHYQ
AAKPAYSTTSAYTGTARQATTTGQAKTYQASGTAYQQSNPTQSATYSSGYTAPATPAATP
STATNKTASTTYSGYDAALYSAATMYVAQQSANSNSTNQKTGGWQGYGRKGFGAGGGGMK
AMRPKQPPKPQQLHYCDVCKISCAGPQTYREHLEGQKHKKKEASLKVPQQPPARGAGNSL
RCELCDVTCTGNDAYAAHIRGAKHQKVVKLHTKLGKPIPSADPTVLNPKPAAKAAAAKKS
TVTATPKINFVASGNLGTVNQNQTAEVKQEESVEETVEEATGDEKDIQPVGQEYIEENKS
EDGKIISFNCKLCECRFNDPNAKDMHMKGRRHRFAYKKKVNPDLIVDMKPSLKQRKMLEE
KLRRQQMRDEYLRRREEINQLGPMGPMMDEEMIYWEERRRYEEECEYFEWYRRYGRGSGA
PPMPRPFQGPPPMMLFPGPQRRPDSSDDKHVLAHHTTIYPKEQELLAVQKIVSHTEKALK
FVSDALAEAGKKNTPANSNATAVNVQAGTPQANADALKKEEADKKKAVTPQKEDGSDGNL
FSFQKEKEDSRILRGVMRVGNLAKGLLLSGDNHVCLVVLCAEKPTRTLLNKVAEILPGEL
KNVAPEETYNVGKHPESAALTVSGGTVTVSVTLTSPLMRETPKSAAADNGGQQQQEAAQL
QTTPAASSVTKPDPPDVLPKAKCLEALAALRHAKWFQARATSLQSCVMVIRIMRDLCNRV
PTWGPLNPWALELLTEKVISTAGGPLSPGEALRRLLECVAGGILLPGSPGLSDPCEKEPV
DAIGNMTSQQREDITSSAQHALRLVAFRQIHKVLGMEQLPPPKFKGRFARKRRRDNSNGE
GTDSEASKKDKKAEEIKMETDSK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaacaattatttcggctttactcacggtgggacgcaatatggggcgaccagc
gccgccgcatatcagaccggccaagcaggatacgcggtaactccagcagctaccgctgcc
acgtacactcaacgacccgctgccgctgctgcgaccggctacgagacgtatcaggcagct
gctgctgcagccgcaactgggacaacgtacgcagctgccaatcctggtaccgtagctcaa
acttacgactacggttacggacgagctgctccagcagctacatacgacgcgactaaaacc
tattaccaacaaccagcagcagctgcagcaacttacactactaccgaaacacattatcag
gctgcaaagcctgcttacagcacgaccagtgcttatactggtactgctagacaagccact
actactggacaagctaagacctatcaagcatccggtacggcttatcagcaatcaaatcct
acgcagagcgctacttattcgtcaggatatacagctccagctacgcctgccgctactcca
tcaactgcaacaaataaaacggcgagtacaacgtattccggctacgacgcagcgctatat
agcgctgcgactatgtatgtagcccaacagagtgcaaacagcaattccactaaccagaag
actggaggttggcagggctacggacggaagggattcggagctggcgggggagggatgaag
gcaatgcggcccaagcagcctcctaagcctcaacaacttcactattgcgatgtctgtaag
atcagctgcgccgggccacagacttatcgtgagcatctggagggtcagaagcacaagaag
aaggaggcctccctgaaggtgccacaacagcccccagcgcgtggagcaggcaacagtctt
cgatgtgagctatgtgatgtaacttgtactggaaatgatgcctacgccgctcatatcaga
ggtgccaagcatcagaaggtcgtcaagttgcacactaaacttggaaaacctataccaagt
gcggatcccacagttctaaatccaaaaccagctgcaaaagctgctgctgctaagaagtcg
acagtgacagcaacacctaaaatcaattttgtcgcttctggaaacttgggcacggtgaat
caaaatcaaactgcagaggttaagcaggaggaatcggttgaagaaaccgtggaagaggct
acgggcgatgagaaggatattcaaccggttggccaagaatatatcgaggagaataaatct
gaggatggaaagatcataagtttcaattgtaaactatgcgagtgtcgattcaacgatccc
aatgccaaagacatgcatatgaaaggtcgccgtcatagatttgcctacaagaagaaggtc
aatcccgatttgattgttgacatgaaaccaagccttaaacaacgcaagatgctggaagaa
aaactacgtagacaacaaatgcgcgatgagtatttacgtcgcagagaagaaatcaaccaa
ttgggacctatgggacccatgatggacgaggaaatgatatattgggaagagaggcgtcgc
tacgaggaagagtgcgaatatttcgaatggtatcgacgatatggacgtggatcaggtgcc
ccgccgatgccgcgtccattccaaggaccgccacccatgatgttattcccaggtcctcaa
agacgaccggattcatctgacgacaaacatgtattggcgcatcatacaactatttatcct
aaggaacaagaactattggcagttcaaaaaatagtttctcacaccgaaaaggcattgaag
tttgtgtcggatgctttagctgaggctggtaaaaagaatactcctgccaattccaatgct
actgcagtaaatgtacaggctggtaccccacaggcaaacgctgatgcattgaagaaagaa
gaagctgataaaaagaaggcagttacaccacaaaaggaagatggaagcgacggaaatcta
ttctcgtttcaaaaggaaaaagaagattctaggatacttcgtggcgttatgcgcgtcgga
aacttggccaaagggctattattatccggagataatcacgtgtgtcttgttgtactgtgt
gcagaaaaacctaccagaacattgctcaataaggttgctgagattttaccgggcgaatta
aagaatgtagctccagaagaaacctacaatgttggaaagcatccggaatccgcggcttta
actgtctccgggggtacagttaccgtcagcgtgacactcaccagccctctgatgcgcgag
acacccaagtctgccgcagcagataatggtggacagcagcagcaggaagctgctcaactg
caaacaacgcccgcagcctccagtgtgacgaaaccagacccaccggatgtacttcccaag
gctaagtgtttggaagctttagctgcactcaggcacgcgaagtggtttcaggctagagct
acctcgctgcagagctgtgttatggttatccgtataatgcgcgacctgtgtaatcgtgtg
ccaacatggggtccgttaaatccttgggcattagaattattgactgagaaagtgattagc
accgctggaggtccccttagtccgggtgaagccttaagaagacttttggaatgcgtagct
ggaggaatattgttaccgggtagtccaggattatccgatccatgtgagaaagagcccgtt
gatgcaataggaaacatgacgtcccaacagagagaagatattacttcgtcggcgcagcat
gctttacgattagtggcattccgccagattcataaagtcctaggtatggaacaattgccg
ccaccgaaattcaagggacgattcgctcgaaaacgaagacgcgataacagtaatggagaa
ggtaccgatagtgaggcttcgaagaaggacaaaaaggcggaagagatcaaaatggaaaca
gattccaagtag
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