Trachymyrmex septentrionalis: 108751650
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Entry
108751650 CDS
T11226
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03440
Homologous recombination
tsep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108751650
03460 Fanconi anemia pathway
108751650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsep03032
]
108751650
03400 DNA repair and recombination proteins [BR:
tsep03400
]
108751650
Enzymes [BR:
tsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108751650
DNA replication proteins [BR:
tsep03032
]
Eukaryotic type
DNA Topoisomerases
108751650
DNA repair and recombination proteins [BR:
tsep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108751650
FA (Fanconi anemia) pathway
108751650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_GRF_2
EF-hand_Zip
Motif
Other DBs
NCBI-GeneID:
108751650
NCBI-ProteinID:
XP_018347437
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MAFFKSYTITLNCMIYYGLKTSNLSSKNLGYTFCLLRQYCSKSIMKVLNVAEKPDAAKNI
AGYLSHGTSRRREGFSKYNKIFEFNIQLWGQNCQMLMTSVSGHLLGYDFTNAYRKWHSCH
PLNLFDAPVSKRCVEENHENIKRTLEREARFCNALIIWTDCDREGENIGFEIIQVCQAVK
PNIRVYRAKFSEITRSSVERALQNLTQPDKAMSDAVDVRSELDLRIGAAFTRFQTLRLQK
VFPNTLGDLLISYGSCQFPTLGFVVERFLAIDRFKSEPYWKLKVMDDREGISVEFRWARV
RLFEKMPCQIFLDMCLEQPEATVEKVTCKPKSKWRPLPLDTIELEKQGSRKLRINAKETM
RIAERLYTQGFISYPRTETNIFPKELNLRSLVEQQVNNQEWGNFAQNLLESGITPRQGKK
SDQAHPPIHPIKYTDNLYGNEAKVYEFVVRHFLACLSKNAEGRETTVEIDIAGEKFKTNG
LEIITKNYLDVYIYEKWNNKQIHSYEQRQVFRPTSIDMVEEKTSAPNLLTEAELIALMDK
HGIGTDATHADHIDTIKSRQYVGLTDTQHFMPGKLGIGLVMGYDNMGFQMSKPHLRADLE
KDLQLICESKKNPNEVLQYQINKYREVFQVAIERANLIDDSLAHYLDERPLQTEQIQLNI
PVSTIFKCPKCGSDMVLKQRRQGRGKYITCMGYPECTNVIWFSEAVEDVEVLNETCNQCT
ENIHKLKFKLVRNVIPMYGTSHTTCIGCDTIFNEMLNIKEDCIKQTGRTNYTVHNNTRNT
LNSTSNTSQSTSNTFQSRSTQLVPNSTGFVRNNNNVDLIGTSVISSDRSNTQNQNSNISQ
SNSSNRSNTVNRSTISDNTENQFSWINSSDFNNPGNRTNQSTFRNSRNTNNVKDIWGNTD
NNSEIICHCHETAIQLTVRKDGPNKGRLFYKCAKPQGSGCNFFLWGSDSAESNTESEYST
WESSSNRNNDSAGHFSGAGTSNNDWGNPSTNNVIGNCNQPARKLTVQKDGPNKGRHFYGC
PKGVNSTCNFFKWADEDDTNDSHTDWSNSTARGIGNKARSKFSQKGNVPKRPKLTGGKRK
CGNCGLEGHTRKKCPNNAMD
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggccttttttaagtcttataccatcacattaaattgtatgatatattacggtctgaaa
actagcaacttgtctagtaaaaaccttggttatacgttttgcttgttaagacaatactgt
tcaaagagtatcatgaaggttctcaatgttgctgaaaaacctgatgctgctaaaaatatt
gctggttatttatcgcatggtaccagcagaaggagggaaggtttctccaagtacaacaag
atcttcgaatttaacatacaactatggggccaaaattgccaaatgctgatgacatctgtg
tctggccatttattaggctatgattttacaaatgcctatcgtaaatggcacagctgtcat
ccattaaacttatttgatgctccagtatctaagcggtgtgtggaagagaatcatgaaaat
attaagagaaccttggagcgagaagcccgattctgcaatgcattgattatttggacagat
tgtgacagagagggggagaacataggttttgagattattcaagtctgccaagcagtcaag
cctaatatccgtgtatatagagcaaaattctcagaaattacgagatcgtctgttgaaaga
gctctgcaaaatttgacacagccagataaggcgatgagcgatgccgtagacgtaagaagt
gaattagatttacgaataggtgccgcgttcacgagatttcagaccttgagattacagaaa
gtgtttcccaacactcttggagatctgctcatcagttacggaagctgccagtttccaacg
ctcggatttgtagtcgagaggtttcttgccatcgatcgcttcaagtctgaaccatattgg
aaactaaaagtaatggacgatcgcgagggaatatctgtagaattcagatgggccagagta
agattgtttgaaaaaatgccttgtcaaatatttctggacatgtgcttggaacagccggaa
gctacagtggagaaagtaacatgcaaaccaaaaagcaaatggagacctttacctctggat
actattgaattggaaaagcaaggttctcgtaagttacgcataaacgcaaaggagacaatg
aggatagcggagagattatatacccaaggttttattagttacccacgcacggaaacgaat
atatttccgaaggaattgaatctaagatctttagtagagcaacaagtaaacaatcaggaa
tggggtaactttgcgcaaaatttattggaatctggaataactcccagacaaggaaagaaa
agcgatcaagcgcatcctcctattcatcccataaagtataccgacaatttgtatggaaac
gaagcgaaggtctatgaatttgtggttcgacattttctggcttgtctgtcaaagaatgcg
gagggccgagaaacaacggtggaaattgatatagcgggagagaagttcaagactaacggt
cttgaaatcataacgaagaattatctcgatgtgtacatatacgaaaaatggaataacaag
cagattcattcttacgagcagcggcaagtttttcgaccaactagcattgatatggtggaa
gagaaaacttcagcaccaaatttattaaccgaggctgagttgatcgcactaatggacaaa
cacggcattggtacggacgctactcatgctgaccatattgataccatcaaatccaggcaa
tatgtgggtttaacggatactcaacattttatgccaggcaaattgggaattggtttggtc
atgggttatgataatatgggctttcaaatgtccaagccgcatttgcgtgcggatttagaa
aaagatttacaactgatatgcgagagtaagaaaaacccaaatgaagtattacaatatcaa
attaataaatatcgcgaagtgttccaagtggctatagaacgcgccaatttgatagacgat
tctttagcacactaccttgacgaaagacctcttcaaactgagcaaatacagcttaatatt
ccagttagtactatatttaaatgtccaaaatgtggctctgacatggttctaaaacagaga
cgacaaggcagaggaaaatatattacctgtatgggatatccagaatgtaccaacgtgatc
tggttttcagaagctgtagaggatgtggaagttttaaatgaaacatgcaatcagtgtaca
gaaaatatacacaaattaaaattcaaattagtcaggaatgtgatacccatgtatggtacc
tctcacacaacttgtataggctgtgatactatatttaacgaaatgttaaacattaaagaa
gattgcattaaacaaactggaagaacgaattatactgttcacaataatacgagaaataca
ttgaattccacctcaaatacatctcaatctacttcaaatacatttcaatcgcgaagtact
cagctagttcctaatagtacaggatttgtacgaaataacaacaatgttgacttgatcgga
acttctgtcatatcatccgacagatcaaatacacaaaaccagaattctaatatttctcag
tcgaatagttcaaataggtcaaatactgtcaatagaagtacaatatcggacaatacagaa
aatcagttttcttggattaattcaagtgattttaacaatccaggaaacagaacaaatcaa
tccacgttcagaaattctcgcaatacaaacaatgtaaaagatatatggggtaatacagac
aataattctgagattatatgtcactgtcatgagactgcaatacagttaacagttagaaaa
gatggaccaaataaaggacgtctgttttacaaatgcgctaaacctcagggaagcggttgt
aacttttttttgtggggatctgatagcgccgagtctaacacagagagcgaatattccact
tgggaatctagctcgaacagaaacaacgatagtgctggtcacttttctggtgctggcact
tctaataacgattggggaaatccgtctacgaataatgttattggtaattgtaatcagccc
gctcgaaagctaacggttcagaaagatggccctaataagggacgacatttttatggatgt
cccaagggtgtaaactccacttgtaattttttcaaatgggcagatgaagatgacaccaac
gatagtcacacggattggagcaattccactgcaagaggaataggaaataaagcacgtagc
aaattttcacaaaaaggcaatgtccccaaaagacctaaactcaccggaggcaagagaaag
tgtggaaattgcggattggaaggtcatacgaggaagaaatgtccgaataacgcgatggac
tga
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