Trachymyrmex septentrionalis: 108751712
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Entry
108751712 CDS
T11226
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep00900
Terpenoid backbone biosynthesis
tsep01100
Metabolic pathways
Module
tsep_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108751712
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tsep01006
]
108751712
Enzymes [BR:
tsep01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108751712
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108751712
Prenyltransferases [BR:
tsep01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108751712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
DUF7704
Motif
Other DBs
NCBI-GeneID:
108751712
NCBI-ProteinID:
XP_018347536
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MSSVARNRFLSALSVARRLVADVTVADYAHVTHISVRRGNTACWRTMDCNVRMVHSATQP
TNTWVTSKDESREMMALWPDVVRDLTDSTKNFIISDVTKWMAKILQYNVPGGKKIRALTL
VYAYKVLAPSDQLTKENIRLARILAWCLELCQAFGLVADDIVDRSLLRRGKPCWYRYNGI
GLAAINDSLLLECSIFYLIKKYFKEKDCYVILLEMFYDSILKTVMGQSLDLLSTNFGKKP
NLDLFTMNRYNSICHYKASHFSFILPITVAMQLAGIKDPEMFRQAKTILLEMGHLFQVQD
DYLGCYSDVHGKDCTDIQEGKCTWLIVVALQRATPEQRKILEECYGSPDPERVRRVKQLF
TDLGLPNTYSIYEEETYNLLNVHIQQISCGLPHSLFLNLLRKIYHRVS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgttgctcggaatcggttcctgtcggcactcagtgtcgcgcggcgcctcgtc
gccgacgtcaccgttgccgattacgcgcacgtaacacacataagcgtgcgccgcgggaat
acggcgtgctggagaacaatggattgtaatgtacgaatggtgcattctgcaacacaaccg
acaaacacatgggtcacaagcaaagatgaaagtcgagagatgatggcattgtggccagat
gttgttcgcgatctcacagattcgactaagaatttcattatttctgatgtcaccaaatgg
atggcaaaaatattacagtacaatgttccaggaggaaaaaaaattcgtgctttaacatta
gtctatgcctataaggtactagcaccaagtgatcaacttacaaaagaaaacattcgtctt
gctcgaattctagcatggtgtctggaattgtgtcaagcctttggactcgtagccgacgat
atagtagaccgatcgttacttcgtcgaggcaaaccatgttggtatcgatacaatggtata
ggcctagcggcaattaatgatagtttactgttagaatgttctatattttatctaattaaa
aaatatttcaaagagaaagattgttacgttattctactagaaatgttctacgatagtata
ttgaaaacagtaatgggccaaagtttagatttgctctctaccaattttggcaagaaaccc
aatctggatctatttacaatgaatcgatataattccatttgtcattacaaagcatcgcac
ttttcttttattttgccaataaccgtagcaatgcagttagctggaataaaagatccagag
atgttcaggcaagcaaaaaccattttgttagaaatggggcatttgtttcaagtccaagat
gattatttaggttgctacagcgatgttcatggcaaggattgtactgatatacaagaggga
aaatgtacatggctgattgttgtagctcttcaacgtgccactccggagcagcgtaaaatt
ctagaagaatgttacggctctccagatccggagagagtaagacgcgtgaaacaacttttc
actgatcttggtttgcctaacacttattccatatatgaagaagaaacatataatctacta
aatgtacatatacaacagatatcatgcgggcttccacatagtcttttcttgaatttatta
agaaagatttatcacagagtgtcatga
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