Trachymyrmex septentrionalis: 108751906
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Entry
108751906 CDS
T11226
Name
(RefSeq) probable oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108751906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108751906
03009 Ribosome biogenesis [BR:
tsep03009
]
108751906
Messenger RNA biogenesis [BR:
tsep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
108751906
Ribosome biogenesis [BR:
tsep03009
]
Eukaryotic type
Pre-60S particles
RNases
108751906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Mrr_N
Motif
Other DBs
NCBI-GeneID:
108751906
NCBI-ProteinID:
XP_018347894
LinkDB
All DBs
Position
Unknown
AA seq
180 aa
AA seq
DB search
MAPKNTNYIVWIDMEMTGLDVDKDHILEIACVVTDKKLNIVSEELNIVIHQSDAILENMN
DWCKETHTKTGLVENSRSSTISLEEAEKTVLDFLKKHIHERSCPLAGSSVYMDRFFLYKN
MPLVNNYLHYRIIDVSTIKEIARRWNPNVYNSASKKRVNHRALDDIKESINELKYYKKYF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctaagaatactaactatattgtttggattgatatggagatgactggacttgat
gtagataaagatcatatattagaaattgcctgtgttgtaacagataagaaattaaatatt
gttagcgaggaattaaatattgtaatacatcagtcagacgcaatattagaaaatatgaat
gactggtgtaaagaaactcacacaaagacgggattagttgaaaactctcgctcaagtact
atatcattagaagaggctgagaagacagtacttgactttttaaaaaagcatattcatgaa
cgttcatgcccattggctggaagttcggtgtacatggatcgtttttttctatataagaat
atgccattagttaataattacttgcactacaggattattgatgttagtacaattaaggaa
attgctagaaggtggaatccgaatgtatataattcggcgtcaaaaaagagagtaaatcat
agggctctggatgatataaaagaaagcattaatgaactaaagtattataaaaaatatttc
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