Trachymyrmex septentrionalis: 108752014
Help
Entry
108752014 CDS
T11226
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03013
Nucleocytoplasmic transport
tsep03015
mRNA surveillance pathway
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108752014
09122 Translation
03013 Nucleocytoplasmic transport
108752014
03015 mRNA surveillance pathway
108752014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108752014
03041 Spliceosome [BR:
tsep03041
]
108752014
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108752014
Spliceosome [BR:
tsep03041
]
Complex C
Other components
EJC/TREX
108752014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
108752014
NCBI-ProteinID:
XP_018348086
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MRRKSERNKTKGSPEKKVEKPTRKSTRRRGKRSPSTSSEQDLFIEDTAKNVIQLKEIEKE
TSMQTRLQSKELEQIPHEEKVSSSDVNIKVDSPENEDNGGSVWKVARADASPGEIQKLKL
CRQRNTSEPSDTPPSSRINVVMSSSKWQESGEGVAEEADSADEQLVSCTRTLSSTEQPND
PSSSYPGQDSNEEVSDSKEILPETTSANLLSDDKPNIDQHGESNEANFTAQVVDIEPGKP
GSMTPSPVPAPSANGEETITTIIIKEAKPAEDISEKPTETFIKETSVENVRKDMNSEDDE
EEEEEEEDKAKMHRPVDSSSDDESRSKRSRTSSDRTSPRATRRKHRNKYRDSSNSDTPDS
EDEPIDKKISESCVEEEEEEQERKPSTEYLQENDKQQSVSPERTNSHSNNVEKIEVEHSK
TIEDKLEKDTTEKLEQCTPANTQVVAHKPVKVNLKRSFSTRILSEKNEIKRDDADASINE
SISQNKENGNEQEPKCVPRKRRWGIALSTDTAPSFSISTDSLKALVPGAKPLSINEVRLS
KDDDEDRDRHRSNDKRHNSSDITYDKITDENLQKNGAAKKGNGKVDNHIVTRRKISIVKE
MPHIKSPSPPTSKPTNILLIKNLVRPFTLNQIKELLSRTGTIVENGFWMDRIKSKCIVEY
SNEDQAFETRQALHGISWPMSNPKKLHVEYATKEDMETARESSKEQPVARKTEPLSSDSW
QQDWSRDEKTNTKVTVVREWDLGKEDGQQHIREKEREKKEHDKKRRVRSRSPILDAHLSA
PARKFKKKEDDPPPAKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHMAEHARRLE
EMRRADRNRDNRRRRTPRK
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtaagagtgaaagaaacaaaacaaagggatctccagagaagaaagtcgagaaa
ccaacaaggaagtcaacgcgtaggcgtggcaagagatcaccttctacttcatctgagcaa
gacctttttatcgaggatacggctaagaatgtcattcaacttaaggagattgaaaaggag
acaagtatgcaaacgcgcctgcagagcaaggaattggagcaaattccacatgaggagaag
gtctcctctagtgatgtaaatataaaggtggactcacccgaaaatgaggacaatggcggc
tcggtatggaaagtagctagagcggatgcatcacctggcgagatacaaaagttgaaatta
tgcaggcagcgcaacacatcagaaccatcagatacaccaccatcgagtaggataaatgtc
gtcatgtcaagtagcaagtggcaagaaagtggtgagggagttgcagaggaggctgactcg
gcggatgagcaactggtttcttgtacaagaaccctcagtagcactgaacagccgaacgat
ccctcctcttcatacccaggtcaggactccaacgaagaggtaagtgatagcaaggagatc
ctgcctgaaaccacttcagccaacttgttgtctgacgataaaccaaacatagatcagcat
ggtgaatcaaatgaggcaaatttcactgcccaagtagttgatatcgaacctggtaagccg
ggtagcatgacaccgtctccagtgccggctcctagcgcgaacggtgaggagactatcacc
actatcatcattaaggaagctaaacctgcggaagacatcagtgaaaagccaacggagaca
tttatcaaagagactagcgtggaaaatgttcgtaaagatatgaatagcgaagatgatgag
gaggaggaagaggaggaggaggataaagcaaaaatgcatcgtccggtggattcatcatct
gatgacgaatcacgctctaaaagaagcagaacaagtagtgatcgaacgtcgccacgtgcg
actcgtagaaaacatcgaaacaaatatagagattcgtctaattcagatacacctgattcc
gaagatgaacctattgacaaaaagatctctgaatcttgtgtggaggaggaagaggaggag
caagagaggaaaccaagtacagaatatttacaagagaatgataagcaacaatcagtgtcg
ccggaaagaacaaattctcattcaaataatgtagaaaaaatagaggtggaacatagtaaa
actattgaagataaattggaaaaagatacaactgaaaaattggaacaatgtacaccggct
aacacacaagtggtcgctcacaagcctgttaaagtcaacttgaaaagatcattctcaaca
agaatattatctgaaaagaatgaaataaaaagagacgatgctgatgcaagcatcaatgag
tccattagtcaaaataaggaaaatggcaatgaacaagaaccaaaatgtgtgccgaggaaa
cgtcgatgggggatcgcactttctacggatactgcgccttcattttctatctctaccgat
tcgcttaaggcattggtgccaggtgcaaagccattatccatcaacgaagttcgtctctca
aaagacgatgatgaagacagagatcggcatagaagtaatgataaacggcacaattctagt
gacattacatatgataagataacagatgaaaacttgcagaaaaatggcgctgctaaaaag
ggcaatggaaaagtagataatcacattgtgacaaggcggaagatatcaatagtgaaggaa
atgccgcatataaaatcgccaagtccaccaacatctaaacctaccaatatccttttgatc
aagaatctagttcgccctttcacactcaatcagatcaaggaacttctctcacgtactggc
accatcgtagagaacggattctggatggatcgaattaagtctaaatgcattgtcgaatat
tccaatgaggatcaggcttttgagacaaggcaggcacttcacgggatctcttggcctatg
tctaatccaaaaaagctccatgtggaatacgctacgaaggaggatatggagactgcccgg
gaatcgtccaaggaacaaccggttgctcgcaaaactgagccactctcgtcagattcgtgg
caacaagattggagtcgcgacgaaaagactaataccaaggtgaccgtggtgagagaatgg
gatttaggcaaagaggacggccagcaacacatcagggagaaggagcgtgagaaaaaggag
catgataaaaagcgacgagtgagaagtcgcagtccaatattggacgcacatctatcggca
ccggctcgcaaattcaagaagaaggaggatgatccgccaccggcaaagcttttggatgat
ctctttaggaagacaaaggcgacaccttgcatatattggttgccgcttacgaatgagcag
atagtcgtgaaagaggagatgcgacggcaacatatggcggaacacgcgcgcagattagaa
gagatgagacgtgccgatagaaatagggacaaccgacgtcgacgtactccgagaaaatag
DBGET
integrated database retrieval system
