Trachymyrmex septentrionalis: 108752177
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Entry
108752177 CDS
T11226
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108752177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108752177
03009 Ribosome biogenesis [BR:
tsep03009
]
108752177
Enzymes [BR:
tsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108752177
Spliceosome [BR:
tsep03041
]
Complex A
U1 snRNP components
U1 related factors
108752177
Complex B
108752177
Ribosome biogenesis [BR:
tsep03009
]
Eukaryotic type
Pre-60S particles
Helicases
108752177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
108752177
NCBI-ProteinID:
XP_018348350
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MYTRDRDQSSRGRRGGTAKIGTSTGRGGIDNGRGGSRFGTPRGNSNNLRGGLKGKQPGGG
LRKVNWDLCTLEPIRKDFYIEHLAVRNRSNEEVYHFRENAEITVKGDNIPNPIQYFEEGN
FPPYVMEGIRREGYSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP
RINTGDGPIVLILAPTRELAQQIQEVANSFGETAAVRNTCIFGGAPKGPQAHDLERGIEI
CIATPGRLIDFLEKGTTNLCRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSA
TWPKEVRALAEDFLTDYVHLNIGSLTLSANHNITQIIDVCQEYEKDSKLYRLLQEIDTEK
ENKTIIFVETKRKVDDLTRNIRREGWQAVCIHGDKNQQERDHVLQEFRSGRAPILVATDV
AARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVL
REAGQNVNPRLSEMAEMAKAGNFSRSVKRFGGSSGVNGVERSNNRRSNNDRGRGGSSARG
RGLARSGTSYQPSSNVYSGTDYSNYNNYNMKQSTSLSQNTTYGYNTQRSYGQGSMPQNYG
GGDNYGSGYPYRSTTY
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtatactcgtgaccgagatcagagtagtagaggtcgtcgtggtggtactgcaaagata
ggaacaagtactggcagaggcggcattgataatggacgtggtggtagcaggtttggcaca
cctagaggaaactccaataatttgcgagggggattgaaaggaaagcaacctggtggcggt
ctaaggaaagtaaactgggatctttgtactttggaaccaatacgtaaagatttttatata
gagcatctcgcagtcagaaacagatctaacgaagaagtatatcattttcgagaaaacgca
gaaataactgtgaaaggtgacaatattcctaatcctatacaatattttgaggagggaaac
tttccaccttacgtaatggaaggtattcgtagagaagggtattcgcagcctactccaatt
caagctcaaggatggcctattgcacttagcggcagagatcttgttgcaattgctcaaact
ggttctggaaagacacttggatatattttacctgcaattgtgcatatcatacatcaaccg
cgcataaatactggtgatggaccaattgtcttgatcttagctccaaccagagaattagct
caacaaattcaagaagtagctaatagctttggagagactgcggctgtaagaaatacgtgt
atttttggcggggctccaaaaggaccacaggcacacgatttggagagaggcattgaaata
tgcattgctacgccaggtagacttatagatttcttagaaaaaggaactacaaacttatgt
aggtgtacgtatctagttctcgatgaagccgatcgtatgcttgatatgggattcgaacct
cagatacgaaaaataattgaacagatacgccctgataggcaagtgctaatgtggtcggcg
acgtggcctaaggaagttcgtgcgcttgcagaagatttcttgacagattacgttcatctc
aatatcggttctttgactctgtcggccaatcataacattactcaaatcattgacgtttgt
caagagtatgagaaagactcgaagctatatagattgcttcaagagattgatactgaaaaa
gagaataagactattatatttgtggaaaccaaacgtaaagtagacgatctcacgagaaat
attagacgcgaaggctggcaagctgtgtgtattcacggtgacaaaaaccagcaggaaagg
gatcatgtattacaagaattccgcagtggaagagcgccgattttagtcgcaactgatgta
gccgctagaggcttggatgtggatgatgtgaagtacgtgataaatttcgattatccatct
tcgtcggaggattatatacacagaatcggtcgaactggacgtaggcgacagaccggaacg
gcgtatgcgtttttcacaagtcacaatatgaaacatgctggagacttgatagaagtttta
cgagaggcgggacagaatgtcaatccgcgtctcagtgaaatggcagagatggccaaggcg
ggaaatttcagcagaagtgtgaaacgtttcggcggttcttctggtgttaatggcgttgag
aggagtaataaccgaagaagtaataatgatagaggaagaggtggcagttcagcaagagga
agaggccttgctcgcagcgggacctcttatcagccttcttcaaacgtttattcgggaacg
gattatagtaattataataattataatatgaaacagagtacttctttgagccaaaataca
acatatggatataacacgcaaagaagctatggacaaggaagtatgcctcaaaattatgga
ggtggcgataattacggaagtggttatccatacagaagcacaacttattaa
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