Trachymyrmex septentrionalis: 108752178
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Entry
108752178 CDS
T11226
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108752178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsep03041
]
108752178
03009 Ribosome biogenesis [BR:
tsep03009
]
108752178
Enzymes [BR:
tsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108752178
Spliceosome [BR:
tsep03041
]
Complex A
U1 snRNP components
U1 related factors
108752178
Complex B
108752178
Ribosome biogenesis [BR:
tsep03009
]
Eukaryotic type
Pre-60S particles
Helicases
108752178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
CglI_C
EarP
Motif
Other DBs
NCBI-GeneID:
108752178
NCBI-ProteinID:
XP_018348351
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MAYGDRSDRSDRRGGGGGGGGGARGGGGRFGGRDGGGGGNRFGSSGNRDNNFGNNNFKNR
QPGERLRKPRWDMSTLPQFRKDFYQPHPNVMARSIHAVEAYRSNKEITVKGANVPGPNIY
FEEGGFPDYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVH
INHQPRLSRNDGPIALILAPTRELAQQIQQVASDFGMSSQVRNTCIFGGAPKGPQARDLE
RGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQT
LMWSATWPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKESKLMKLLEE
ISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAIL
VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAGD
LIQVLEEAKQVVNPKLYDLSRNPGILQRGRYGGRSGGGGGGGRGSGRGGSRGSRGGRDAG
DRGRFDRSSGTGASDRNKWSGSSSGGIGGASYGSSKSFPQNSFGSGTSGGGSGSYSQNNS
GYGSSYRQQNGY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcatatggcgaccgctctgatcgttctgatagacgaggaggaggaggaggaggtggc
ggtggagcacgtggtggtggtggtagattcggcggacgtgatggaggcggaggaggcaat
agatttggcagcagcggaaacagagacaacaattttggaaacaacaattttaaaaatcgg
cagcctggggaacgattacgtaaaccacgatgggatatgagcactctaccacaattcaga
aaggacttttatcagccacatcctaacgtaatggcacgaagtattcacgctgtagaggca
tatcgttccaataaagagattactgtgaagggggctaacgttccaggtcccaatatttat
ttcgaagaaggtggcttcccagactatgttctcaacgagattcgtagacaaggatttggt
gaaccaaccgcgatccaggcacaaggttggcctattgccttgtccggccgagatatggtc
ggtatagcgcaaacgggttcgggaaagactttggcatacattttaccagcgatcgtgcat
ataaatcatcagcctagactgagcaggaacgatgggccgatcgcattgatcttagcacca
actcgagaattggcacaacaaattcaacaagtagcgtcagattttggcatgtcttctcag
gtgcgaaacacatgcatcttcggtggtgctccgaaaggacctcaggcgcgcgacctcgag
cgcggcgtagagatttgcattgctacgccaggacgtcttatagactttttggaacgtggc
acaactaatctacgtagatgtacatatttagtacttgatgaggccgatagaatgctcgat
atgggcttcgagcctcaaattaggaaaattgtagaacaaatacgtcccgaccgtcagact
ctcatgtggtcggcgacatggccaaaggaagtacgtaatctcgcggaagaattcctaacg
gattacatacagatcaacattggttctctgcaattggctgccaatcacaatattctgcaa
atcgttgatgtatgtgaggaatatgaaaaggagagtaagctcatgaaattattagaagaa
atctcaaacgaaccggaaaataagactataatatttgtcgaaactaaaaggaaagtggat
gatataacaagagctattaatagatacggatggcaagcgattggtattcacggagataaa
agccaacaagaaagagattatgtattaaatcagttccggaatagcagatctgccatcctt
gtggctactgatgtggcggcgagaggtttagatgtcgaggatgtcaaatttgtgataaac
ttggactatccgtctaactctgaggactatgtgcaccgtatcggacgtacgggtcgttcg
cagcgtacaggaaccgcgtacgcctttttcacacctggcaatgctcacaaggctggtgac
ttaattcaagttttagaagaagctaagcaagttgtcaatccgaaactatatgatttatcc
cgaaatcctggcattttgcagagaggacgctatggtggacgcagcggaggtggtggaggc
ggtggacgaggatctggccgtggtggttcacgaggatctcgtggaggccgtgatgcagga
gatagaggaagattcgaccgctcttccggtactggtgcaagtgatcgcaacaaatggtcc
ggaagtagtagcggtggcataggcggggctagctatggaagcagtaaatcgttccctcaa
aacagctttggaagtggaacttccggcggtggctctggtagctatagccagaacaatagt
ggatatggaagcagctacaggcaacaaaacggctattga
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