Trachymyrmex septentrionalis: 108752554
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Entry
108752554 CDS
T11226
Name
(RefSeq) protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108752554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108752554
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108752554
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108752554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTG
TFIIA
VPS13_N
Connexin
EFTUD2
DUF4770
EOS1
MPM1
TERB2
Phage_GPO
Zip
Motif
Other DBs
NCBI-GeneID:
108752554
NCBI-ProteinID:
XP_018348926
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFKGHWYPEKPFKGSAFRCLKT
GDPVDPVLERAAKESGVPIQDILENLPAELAVWVDPGEVSYRIGELNAVKILYSETGDPH
DETSADREVTKTFNPEAQCFRPIEAVSTSLSGLSLSPKSTSPFSSSLGSNASNGSSNNQQ
NGHGSGSSSAPSPTPITSSFKGSPSPVPAFIPRTTAPLTFTTATFAQTKFGSTKLKTSSK
RANRMSPTEFSNYIKQRAAMQQQIHHHHHHQQQQQQHQSQQQQQQQQQQQQQQQQQQQQQ
QQQQQQATAVGAGLPVSQSSPRSRSLSPGSIVAGAGQQHTDPSAYFFQHGPAAAAAAYHA
QFPHRNIFDSSASHGGYLPADLYAGTKFPSSYLDPTTLAGHQFYGGGMNGAGAGTGGAVN
GTNGAGAGTQGAGSAGAGNLGPIGSATTNGNVNGGATAAAQQQDKSALVEGLNNFGLGSV
APYPASQYQHLLVAN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcgaggtgcaggtggcgcttaacttcgtgatatcgtatctctacaataaactg
ccgcgtagacgagtcaacatcttcggcgaagagctcgagaaggcgctcaaggacaagttc
aaaggccactggtatccggagaagccgttcaagggctcggcgttcaggtgcctcaagacc
ggtgatccggtcgacccggtgctggagcgcgccgcgaaagagagcggtgtgccgatccag
gatatcctggagaatctgccagccgagctcgccgtctgggttgatcctggtgaggtgagc
taccgtatcggcgagctgaacgccgtgaagattctctactcggagaccggcgatccgcac
gacgagacctcggccgatcgcgaggtcaccaagaccttcaatcccgaggcgcagtgcttc
aggccgatcgaagctgtaagcacgtccttgagcggtctcagcctcagtccgaaatcaacc
tcgccgttttcgagctccctcggcagcaacgccagcaacggctcgtccaacaaccagcag
aacggccacggatccggttcctcgtctgcgccctcacccacgcccatcaccagctccttc
aagggctcgcccagccccgtaccggccttcatcccgcgtaccaccgccccgctcaccttt
accaccgctaccttcgcccagaccaagttcggcagcactaagctcaaaactagcagcaaa
cgcgccaacaggatgtcacccactgagttctcgaactatataaagcagcgcgcagcgatg
cagcagcagattcaccatcaccaccatcatcagcagcagcaacagcagcatcagtcgcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcag
caacagcagcagcaacaggcgaccgcggttggtgcaggattgccggtctcccagagctcg
ccgcgcagtcgtagcctatcgcccggtagcatagtcgccggcgctggacagcaacatacg
gacccgagtgcgtacttcttccaacatggcccagccgcggccgcggcggcgtaccacgcg
cagttcccccatcgcaacatcttcgactcgtcggcgagccacggtggctacctgccggcc
gatctctacgccggcacgaaattcccatcgtcgtacctcgacccgaccaccctggctggc
catcagttctacggcggcggcatgaacggcgctggcgccggtaccggcggcgctgtaaac
ggcaccaacggcgccggagccggtactcagggcgccggtagcgccggcgccggtaatctc
ggtccaatcggctcggcgacaaccaacggcaacgtcaacggtggcgcgaccgccgcggcg
cagcagcaggacaagagtgccctggtcgagggcctcaacaacttcggcctcggctcggtc
gcaccctatccggccagccaatatcagcacttgctcgtggccaactaa
DBGET
integrated database retrieval system