Trachymyrmex septentrionalis: 108752562
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Entry
108752562 CDS
T11226
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108752562
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108752562
NCBI-ProteinID:
XP_018348947
LinkDB
All DBs
Position
Unknown
AA seq
1799 aa
AA seq
DB search
MFHYGHVALAALIIVTITLAGPAVSQHVRDKVPSRGSVQRGDMSPMDVVTERRNRLGSII
PTSRGSHAKRPHPCEQSSCYPATGNLLIGRKDKLTASSTCGLHGPERFCIVSHLKDRKKC
FFCDASIPKQQHNIENIVSGSWWQAENGVENVTIRFDLEAEFHFTHIIIRFQTFRPAAML
IERSYDFGKTWQVYRYFAHNCEHYFPDIPTHQPQRLTDVICETRYSAVAPSTGGDVIFRV
LPRNLEIDNPYSKEVQNLLKITNLRIIMTRLHTLGDDLLDDRAEIREKYYYAIQDMVIRG
SCSCYGHASRCLPLPGVSDEENMVHGRCECTHNTKGLNCESCEDFYNDLPWKPAVGKQTN
ACRPCNCNNHTNSCHFDETVYERSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDVTKDIS
DPEACQPCDCNLDGSLDDGICDSRTDPLSGDESGRCHCKANVDGRRCDRCKNGFWNFDPD
SPEGCQACTCNILGTIDNQGCNVVTGECTCKRYVTARDCNQCLPEYWGLSEDRDGCKPCD
CDPGGSYENSCDVITGQCRCRPHVSGRTCNQPEQSYYTGSLDFLIYEGELSRATDNCQVV
IREPYRDGRNSTWTGTGFMKALEGSVLNFTIDDIRRSMWYDVIVRYEPVHPGVWEDVQVI
LERDSLPDPNGPCADWKPEYDRLWVQLPLRSRSAVAQPSVCLEAGKRYNLLLQFRKFNSH
VDTPLASILVDSIVLKPRIDVIPFFKAPGLGELRRQEYERYHCNEIYNDVNSVWNNVPDI
CKKYQNSIGYYVFDGAHSCECNPTGSRSLLCKNYGGMCPCKPNVVGRRCDRCAPGTYGFG
PEGCISCDCDGVGALDNFCDVETGRCKCRPNTYGRTCGQCEPGFWNFPHCQRCECHGHAD
SCDSKTGACINCRDFTTGHNCDRCVDDFYGDPRIGVDIPCRACPCPGTRESGHSYANSCS
LDSITQDVVCECFEGYSGPRCEHCAENYFGNPEIPGGSCQLCNCNNNTDLRRVGNCDPHT
GHCLQCLFNTDGYTCEVCKAGFYGDALRQDCQDCRCNVLGTDKTAGSCDHRTGQCPCLPH
VIGQLCDSCEENHWRIASGQGCDPCECDVVGSISDRCNPYDGTCECKPGFGGRRCNECQT
NFWGNPNVECYPCECDVIGSASQQCDRETGVCICHKGIGGEKCDQCDRGYHGEAPQCSPC
GECFDNWDLILDGLRNKTNAVIQEASRIQKVGTTGVYSQEFDDMEESLNEVQDLISNTTI
RSQDLDALDNLAEELAKNISESAKQLDEANNHLENLSQRVNLGDVALKKLRNRTNSLHEA
AADLRENATRLQEENVLGALNVTQQMAEQSRQAEKMANDSTNVLGDAERFRKHTENLLAK
NRASVDEAQERNKESLTKLNEKLKMFSMAVPELNLRMCGDNVTECSSVCGGAGCGTCGGL
SCDVGAVSKANQALDVAKQQAAKIKSHKDDAEQLLRNMSQIKQDATVARSNAQDAFNIAW
QAESFFEKLTKNMANMIKQMLSTQDEDQPTPAMVRALAYSILARNIQLEPDQIAHLADRI
KDMVGSLTDSEKILTDTKDDLRLAHNLEERANQIKSTAIEKQVLANKMILLLNDAQKAQH
LAQDAIDKAEADVSKSQKDLVDIADVTKAAQIQANSTTQTVEALDARLKQLQTQSAKNSF
VLTEIGTETKKVADEAQAIDGKTKKLSEEYKRADESLNQRVNKTKGDIQRAKRLLTRASE
LTADTSTKSKDLDGMESVYKENERLLKELMSDVDVLMMEMERNMAEIEKKSQLYRQCSA
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattatgggcacgtggctctcgcagctttaattattgtaactattactttagca
ggacctgcggtttcacaacatgtgcgggacaaagtaccatccagaggatcggtgcagaga
ggagatatgtcacctatggatgtggtgacagaacgtcgtaatcggctagggtcgatcatt
cccacgtcaagaggatcgcacgcgaaaagaccgcatccctgcgaacagagctcgtgttat
cccgcaaccgggaacttgctaatcggtcgtaaggacaaactgactgcttcgtcgacatgc
ggtcttcatggtcccgaaagattctgcattgtctctcatcttaaagacagaaagaaatgc
ttcttctgcgatgcatcgatacctaaacaacagcataatatcgagaacatcgtcagcggg
tcgtggtggcaagccgaaaacggagtggagaatgtcacgatacgcttcgatcttgaagca
gaatttcacttcacgcacatcattattcgcttccaaactttccgaccggctgctatgctg
atcgaacgatcgtacgattttggaaaaacctggcaggtatatcggtacttcgctcataac
tgcgagcattacttccccgatattccgactcatcaacctcaaagattaacggatgtcatc
tgcgagacgagatactcagctgtggcaccgtccactggcggtgacgtaattttcagggta
ttgccgcgaaatttggaaatagataatccttattcgaaggaagtgcagaatctactgaag
atcaccaatctcaggatcatcatgactagactccacactctaggcgatgatttgctcgac
gatcgggctgagattcgcgagaaatattattacgccatccaagatatggtgattcgtggt
tcgtgttcttgctatggacatgcctctaggtgtttaccgttaccaggagtctctgatgaa
gagaacatggtccacggcagatgtgagtgtacacacaatactaaaggcctcaactgtgag
agttgcgaagacttctacaacgatctgccgtggaagcccgcggtcggcaaacaaacgaac
gcttgtagaccttgcaattgcaacaatcatactaattcttgtcacttcgatgaaacggtc
tacgagagatcgggcagagtgtccggcggagtctgcgacgattgccagcacaatacgcga
gggcaaaattgcgaacaatgcaagccattctattatcacgacgtgacaaaggatatctct
gatccagaagcttgtcaaccctgcgactgtaacctagacggatccttagatgatggcata
tgcgactctagaactgatcctctaagtggcgacgaatctggacgctgtcactgtaaagcg
aatgttgacgggcgtcgttgtgaccgttgtaaaaacggcttctggaacttcgatcctgac
agtccagagggatgtcaagcctgcacctgtaatatcttgggtaccatcgataatcagggt
tgcaacgtggtgaccggtgagtgtacgtgcaaacggtatgtcacagcgcgcgactgcaat
caatgcttaccggagtattggggactctccgaggatcgcgatggatgcaaaccatgcgat
tgcgatcctggtggatcctacgaaaattcctgcgacgtcatcaccggtcagtgcagatgc
agaccacacgtcagcgggagaacttgcaatcaaccggagcaaagttactacaccggctcg
ctagattttctcatttacgaaggagagttgtctagggctactgataattgtcaagtggta
attagagagccttatcgcgatggtaggaacagcacatggaccggtacaggtttcatgaag
gccctcgaaggctcggtattgaacttcactatcgacgatattcgcagatcaatgtggtat
gatgtgattgtacgatatgaaccggtgcatccgggagtctgggaggacgtgcaggttatt
cttgagagagatagcttacctgatcctaatggaccgtgtgccgattggaaacctgaatac
gatcgcctgtgggttcagttacctctacgttcgagaagtgccgtggcacaaccgtctgta
tgtttagaggcaggaaaacgttacaatcttctactgcaattccgcaaatttaatagccac
gtggacacgcctttggcctccatcctggttgattcgattgttttgaagccaaggatagac
gtgatacccttcttcaaggcaccgggtctgggtgaactgcgtcgtcaagaatacgaacgt
tatcactgtaatgaaatatataacgatgtcaacagcgtgtggaacaacgtacccgacatc
tgtaagaagtatcaaaatagcatcggctattatgtcttcgatggcgctcattcttgcgaa
tgtaacccaacgggttctcgcagtcttctgtgcaagaactacggcgggatgtgcccgtgc
aagccaaacgtagttggtagacgttgtgatcgttgcgcgccgggaacctacggtttcggt
ccggagggatgcatctcctgcgattgcgacggcgtcggtgcactcgacaatttctgcgac
gtcgagactggacgctgcaagtgtcgccccaatacctacggcaggacctgcggccaatgt
gagcctggcttctggaacttccctcattgccaacgttgtgagtgtcacggacacgcggac
agttgcgactcaaagaccggggcctgcatcaattgtcgagatttcaccaccggacacaat
tgcgaccgttgcgttgacgatttctatggcgatccgcggattggcgtggatataccttgc
agagcgtgtccttgtccaggcacacgtgaatccggtcattcctacgccaacagctgttca
ttagactcaataacgcaggatgtagtgtgcgagtgtttcgagggatactccggaccccgc
tgcgagcattgcgctgagaattatttcggcaacccggagataccaggcggtagctgtcaa
ctctgtaactgtaacaataacacagatttacgtcgtgtcggtaactgcgatccgcacacc
ggtcattgtctccaatgtctcttcaacactgacggttacacttgcgaggtgtgcaaagca
gggttctacggagacgctctacggcaggattgtcaagactgtagatgtaacgtcctgggc
accgacaagaccgcgggatcgtgcgaccatcgtaccggacaatgtccgtgtctgcctcac
gtcataggacagctttgcgactcttgcgaggaaaatcattggagaatagccagcggacaa
ggttgcgatccttgcgagtgcgacgtagttggaagtatttcagacagatgcaatccctac
gacggcacttgcgagtgcaaaccaggattcggtggcaggcggtgcaacgagtgtcagaca
aacttctggggaaacccgaatgtggagtgttatccatgcgaatgtgacgtgatcggttcc
gccagccagcaatgtgacagggagaccggagtatgcatttgccataagggtatcggcggt
gagaagtgcgatcaatgcgaccgtggctatcacggcgaagctccgcaatgcagcccatgc
ggtgaatgcttcgacaattgggatctgatattagacggtcttaggaacaaaacaaacgca
gtcattcaggaggcctcgaggatacagaaggtcggtacgacaggtgtttacagtcaggaa
ttcgacgacatggaggaatctctaaatgaagtacaagacttaattagcaacactaccatt
cggagtcaagacctggacgcgttggacaacttggccgaagagttggcgaagaatatctcc
gaatcggccaagcagttggacgaagcgaataatcacttggagaatctcagtcaacgagtt
aatcttggtgacgttgcgttgaagaaattgaggaacaggactaatagcttgcatgaggcc
gccgccgatttgcgggagaatgccaccaggttacaggaagaaaatgttttaggcgctctc
aatgtaactcagcagatggcagagcaatccagacaagccgagaaaatggcaaacgactct
acgaatgtcctgggcgatgcagaacgattccgcaagcatactgagaacctcctggcgaaa
aatcgcgcatctgtggacgaggctcaagaaaggaacaaggagtcattgacgaagttgaat
gagaaactgaagatgttcagtatggcagtacctgagctaaatctacgcatgtgtggtgac
aatgtaacggagtgtagtagcgtctgcggcggcgcgggttgtggcacctgtggaggatta
tcttgtgacgtaggcgcggttagcaaggctaatcaagctttagatgttgccaaacagcaa
gctgccaagatcaagagtcataaggacgatgccgaacaactattacgtaatatgagccaa
atcaagcaagatgcaacagtggcaagatcaaacgctcaagacgctttcaacatcgcatgg
caggcggaaagcttctttgagaagctcaccaagaatatggcaaacatgatcaaacaaatg
ttgagcactcaggatgaggaccaacctacaccagctatggtaagagctcttgcgtactca
atactcgcgaggaatatccagctggagccggatcaaatcgcacacttggccgatcgcatc
aaggatatggtgggctctctcactgactccgagaagattctcaccgataccaaagacgat
ctacgcttggcgcataacctcgaggaacgcgctaatcaaattaaatcgacagccatcgag
aaacaagtcttggcgaacaaaatgattttgttgttgaacgatgcacaaaaggcgcaacat
ctggcgcaggacgcgatcgataaggcggaagctgacgtgtccaaatcgcagaaagatctc
gtggacattgccgacgtgacaaaggccgctcagatccaagctaacagtaccacacaaacg
gtagaagcattagatgctcgtttgaagcagcttcagacgcaatctgcaaagaacagtttc
gttctaacggagatcggcacagaaacaaagaaagtcgccgatgaggcacaagcaatcgac
ggaaagacgaaaaaactgtcggaggaatacaagagggcggatgagtcactgaatcagcga
gtcaataagaccaaaggcgatattcagcgggcgaagagactcttaacgcgtgcttccgag
ctaacagcagacacgtcgaccaagtcgaaggatctggacggcatggagagtgtttataag
gaaaatgaacgactgctgaaggaactgatgagtgatgtagacgtgctaatgatggaaatg
gaaagaaacatggcggagatcgagaaaaagtcgcagttgtacagacagtgttctgcttaa
DBGET
integrated database retrieval system
